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Discovery that Connects

Science-based innovation for a changing world

Recent publications from the SIPS community – August 10, 2023

Regulation of nutrient utilization in filamentous fungi.

Kerkaert, J. D., and Huberman, L. B. 2023. Applied Microbiology and Biotechnology.

Genomic prediction of seed nutritional traits in biparental families of oat (Avena sativa).

Brzozowski, L. J., Campbell, M. T., Hu, H., Yao, L., Caffe, M., Gutiérrez, L. a., Smith, K. P., Sorrells, M. E., Gore, M. A., and Jannink, J.-L.  The Plant Genome n/a:e20370.

Synchrotron Science for Sustainability: Life Cycle of Metals in the Environment.

Smieska, L., Guerinot, M. L., Hoal, K. O., Reid, M., and Vatamaniuk, O. 2023. Metallomics.

Visualizing Metal Distribution in Plants Using Synchrotron X-Ray Fluorescence Microscopy Techniques.

Chia, J.-C., Woll, A. R., Smieska, L., and Vatamaniuk, O. K. 2023.  Pages 177-189 in: Plant Iron Homeostasis: Methods and Protocols. J. Jeong, ed. Springer US, New York, NY.

Decomposition decreases molecular diversity and ecosystem similarity of soil organic matter.

Davenport, R., Bowen, B. P., Lynch, L. M., Kosina, S. M., Shabtai, I., Northen, T. R., and Lehmann, J. 2023.  Proceedings of the National Academy of Sciences 120:e2303335120.

Changes in the supply chain outcomes of food regionalization, 2007–2017: Broccoli in the eastern United States.

Dai, B., Gómez, M. I., Atallah, S. S., and Björkman, T. 2023. PLOS ONE 18:e0287691.

Practical Considerations for Using the NeoSpectra-Scanner Handheld Near-Infrared Reflectance Spectrometer to Predict the Nutritive Value of Undried Ensiled Forage.

Feng, X., Cherney, J. H., Cherney, D. J. R., and Digman, M. F. 2023.  Sensors 23:1750.

Microbial Models for Simulating Soil Carbon Dynamics: A Review.

Chandel, A. K., Jiang, L., and Luo, Y. 2023.  Journal of Geophysical Research: Biogeosciences 128:e2023JG007436.

Assessing carbon storage capacity and saturation across six central US grasslands using data–model integration.

Wilcox, K. R., Collins, S. L., Knapp, A. K., Pockman, W., Shi, Z., Smith, M. D., and Luo, Y. 2023. Biogeosciences 20:2707-2725.

Infrastructure to factorially manipulate the mean and variance of precipitation in the field.

Rudgers, J. A., Luketich, A., Bacigalupa, M., Baur, L. E., Collins, S. L., Hall, K. M., Hou, E., Litvak, M. E., Luo, Y., Miller, T. E. X., Newsome, S. D., Pockman, W. T., Richardson, A. D., Rinehart, A., Villatoro-Castañeda, M., Wainwright, B. E., Watson, S. J., Yogi, P., and Zhou, Y. 2023.  Ecosphere 14:e4603.

An evaluation of nitrogen indicators for soil health in long-term agricultural experiments.

Liptzin, D., Rieke, E. L., Cappellazzi, S. B., Bean, G. M., Cope, M., Greub, K. L. H., Norris, C. E., Tracy, P. W., Aberle, E., Ashworth, A., Tavarez, O. B., Bary, A. I., Baumhardt, R. L., Gracia, A. B., Brainard, D. C., Brennan, J. R., Reyes, D. B., Bruhjell, D., Carlyle, C. N., Crawford, J. J. W., Creech, C. F., Culman, S. W., Deen, B., Dell, C. J., Derner, J. D., Ducey, T. F., Duiker, S. W., Dungan, R. S., Dyck, M. F., Ellert, B. H., Entz, M. H., Solorio, A. E., Fonte, S. J., Fonteyne, S., Fortuna, A.-M., Foster, J. L., Fultz, L. M., Gamble, A. V., Geddes, C. M., Griffin-LaHue, D., Grove, J. H., Hamilton, S. K., Hao, X., Hayden, Z. D., Honsdorf, N., Howe, J. A., Ippolito, J. A., Johnson, G. A., Kautz, M. A., Kitchen, N. R., Kumar, S., Kurtz, K. S. M., Larney, F. J., Lewis, K. L., Liebman, M., Ramirez, A. L., Machado, S., Maharjan, B., Gamiño, M. A. M., May, W. E., McClaran, M. P., McDaniel, M. D., Millar, N., Mitchell, J. P., Moore, A. D., Moore Jr., P. A., Gutiérrez, M. M., Nelson, K. A., Omondi, E. C., Osborne, S. L., Alcalá, L. O., Owens, P., Pena-Yewtukhiw, E. M., Poffenbarger, H. J., Lira, B. P., Reeve, J. R., Reinbott, T. M., Reiter, M. S., Ritchey, E. L., Roozeboom, K. L., Rui, Y., Sadeghpour, A., Sainju, U. M., Sanford, G. R., Schillinger, W. F., Schindelbeck, R. R., Schipanski, M. E., Schlegel, A. J., Scow, K. M., Sherrod, L. A., Shober, A. L., Sidhu, S. S., Moya, E. S., Luce, M. S., Strock, J. S., Suyker, A. E., Sykes, V. R., Tao, H., Campos, A. T., Van Eerd, L. L., van Es, H. M., Verhulst, N., Vyn, T. J., Wang, Y., Watts, D. B., Wright, D. L., Zhang, T., Morgan, C. L. S., and Honeycutt, C. W. 2023. Soil Science Society of America Journal 87:868-884.

Multi-omics analysis reveals the mechanism of calcium-reduced quality deterioration in mechanically injured green pepper fruit.

Ma, L., Zheng, Y., Sang, Z., Ge, Y., Bai, C., Fu, A., Wang, Q., Watkins, C. B., and Zuo, J. 2023.  Postharvest Biology and Technology 204:112437.

Glutathione is involved in selenium detoxification and suppresses the selenate-induced SULTR1;1 gene expression in plants.

Cardoso, A. A. d. S., Namorato, F. A., Guilherme, L. R. G., Silva, M. L. d. S., Liu, J., and Li, L. 2023. Environmental and Experimental Botany 213:105424.

Biopesticides provide inadequate control of three foliar bacterial diseases of tomato transplants.

Meadows, I. M., McGrath, M. T., Rotondo, F., and Miller, S. A. 2023. Crop Protection 172:106329.

CRISPR/Cas9-induced DNA breaks trigger crossover, chromosomal loss, and chromothripsis-like rearrangements.

Samach, A., Mafessoni, F., Gross, O., Melamed-Bessudo, C., Filler-Hayut, S., Dahan-Meir, T., Amsellem, Z., Pawlowski, W. P., and Levy, A. A. 2023. The Plant Cell.

Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?

Gryganskyi, A. P., Golan, J., Muszewska, A., Idnurm, A., Dolatabadi, S., Mondo, S. J., Kutovenko, V. B., Kutovenko, V. O., Gajdeczka, M. T., Anishchenko, I. M., Pawlowska, J., Tran, N. V., Ebersberger, I., Voigt, K., Wang, Y., Chang, Y., Pawlowska, T. E., Heitman, J., Vilgalys, R., Bonito, G., Benny, G. L., Smith, M. E., Reynolds, N., James, T. Y., Grigoriev, I. V., Spatafora, J. W., and Stajich, J. E. 2023. Microorganisms 11:1830.

A soil matrix capacity index to predict mineral-associated but not particulate organic carbon across a range of climate and soil pH.

King, A. E., Amsili, J. P., Córdova, S. C., Culman, S., Fonte, S. J., Kotcon, J., Liebig, M., Masters, M. D., McVay, K., Olk, D. C., Schipanski, M., Schneider, S. K., Stewart, C. E., and Cotrufo, M. F. 2023. Biogeochemistry.

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