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Discovery that Connects

Science-based innovation for a changing world

Recent publications from the SIPS community – November 19, 2020

Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding.

Wang, X., Gao, L., Jiao, C., Stravoravdis, S., Hosmani, P. S., Saha, S., Zhang, J., Mainiero, S., Strickler, S. R., Catala, C., Martin, G. B., Mueller, L. A., Vrebalov, J., Giovannoni, J. J., Wu, S., and Fei, Z. 2020. Nature Communications 11:5817.

Phased diploid genome assemblies and pan-genomes provide insights into the genetic history of apple domestication.

Sun, X., Jiao, C., Schwaninger, H., Chao, C. T., Ma, Y., Duan, N., Khan, A., Ban, S., Xu, K., Cheng, L., Zhong, G.-Y., and Fei, Z. 2020.  Nature Genetics.

An xa5 Resistance Gene-Breaking Indian Strain of the Rice Bacterial Blight Pathogen Xanthomonas oryzae pv. oryzae Is Nearly Identical to a Thai Strain.

Carpenter, S. C. D., Mishra, P., Ghoshal, C., Dash, P. K., Wang, L., Midha, S., Laha, G. S., Lore, J. S., Kositratana, W., Singh, N. K., Singh, K., Patil, P. B., Oliva, R., Patarapuwadol, S., Bogdanove, A. J., and Rai, R. 2020.  Frontiers in Microbiology 11.

 Callose deposition is essential for the completion of cytokinesis in the unicellular alga Penium margaritaceum

Davis, D. J., Wang, M., Sørensen, I., Rose, J. K. C., Domozych, D. S., and Drakakaki, G. 2020. Journal of Cell Science 133:jcs249599.

Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex.

Geiser, D. M., Al-Hatmi, A., Aoki, T., Arie, T., Balmas, V., Barnes, I., Bergstrom, G. C., Bhattacharyya, M. K. K., Blomquist, C. L., Bowden, R., Brankovics, B., Brown, D. W., Burgess, L. W., Bushley, K., Busman, M., Cano-Lira, J. F., Carrillo, J. D., Chang, et al. 2020. Phytopathology 0:null.

The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.

Arnaud, E., Laporte, M.-A., Kim, S., Aubert, C., Leonelli, S., Miro, B., Cooper, L., Jaiswal, P., Kruseman, G., Shrestha, R., Buttigieg, P. L., Mungall, C. J., Pietragalla, J., Agbona, A., Muliro, J., Detras, J., Hualla, V., Rathore, A., Das, R. R., Dieng, I., Bauchet, G., Menda, N., Pommier, C., Shaw, F., Lyon, D., Mwanzia, L., Juarez, H., Bonaiuti, E., Chiputwa, B., Obileye, O., Auzoux, S., Yeumo, E. D., Mueller, L. A., Silverstein, K., Lafargue, A., Antezana, E., Devare, M., and King, B. 2020.  Patterns 1:100105.

Building a tRNA thermometer to estimate microbial adaptation to temperature.

Cimen, E., Jensen, S. E., and Buckler, E. S. 2020.  Nucleic Acids Research.

Biochemical basis of differential selenium tolerance in arugula (Eruca sativa Mill.) and lettuce (Lactuca sativa L.).

Santiago, F. E. M., Silva, M. L. S., Cardoso, A. A. S., Duan, Y., Guilherme, L. R. G., Liu, J., and Li, L. 2020. Plant Physiology and Biochemistry 157:328-338.

First Report of Dickeya dianthicola causing blackleg on New Guinea Impatiens (Impatiens hawkeri) in New York State, USA.

Liu, Y., Vasiu, S., Daughtrey, M. L., and Filiatrault, M. 2020.  Plant Disease 0:null.

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