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Discovery that Connects

Science-based innovation for a changing world

Recent publications from the SIPS community – August 14, 2025

Applying large language models to extract information from crop trait prioritization studies.

Farmer, E.E., Brown, D., Gore, M.A., and Tufan, H.A. 2025.  Plants People Planet doi: https://doi.org/10.1002/ppp3.70075

Affordable phenomics: Expanding access to enhancing genetic gain in plant breeding.

Hoyos-Villegas, V., Jackson, M., Vargas-Cedeño, M., Farmer, E.E., Hanneman, M., Mazis, A., Singh, K. D., Sangjan, W., McNair, M., Sankaran, S., Tirado Tolosa, S., Gore, M. A., and Rife, T. W. 2025.  The Plant Phenome Journal 8:e70034. doi: https://doi.org/10.1002/ppj2.70034

Phenotypic plasticity in maize grain yield: Genetic and environmental insights of response to environmental gradients.

Ozair, F., Adak, A., Murray, S.C., Alpers, R.T., Aviles, A.C., Lima, D.C., Edwards, J., Ertl, D., Gore, M.A., Hirsch, C.N., Knoll, J.E., Schnable, J.C., Singh, M.P., Sparks, E.E., Thompson, A., Weldekidan, T., and Xu, W. 2025.  The Plant Genome 18:e70078. doi: https://doi.org/10.1002/tpg2.70078

The role, regulation and application of plant fruit trichomes.

Fu, Y., Li, M., Zhang, W., Liu, X., Huang, L., Zhang, S., Liang, X., Zhang, L., Tang, K., Rose, J. K. C., and Shen, Q. 2025.  Molecular Horticulture 5:41.

Floral symmetry and scaling relationships between tepal mass and area in the daylily (Hemerocallis fulva).

Yan, H., Shi, P., Yao, W., Jiang, F., Chen, L., Deng, L., Lian, M., Heng, Y., and Niklas, K. J. 2025.  Frontiers in Plant Science Volume 16 – 2025.

Mediated pleiotropy drives the negative correlation of total carotenoid and dry matter contents in cassava (Manihot esculenta).

Villwock, S. S., Parkes, E. Y., Nkouaya Mbanjo, E. G., Rabbi, I. Y., and Jannink, J.-L. 2025.  Genetics.

Biochar in the circular bionutrient economy.

Lehmann, J., Barrios, E., Devault, M., Li, L., Nelson, R., Six, J., and Trimmer, J. 2025. Proceedings of the National Academy of Sciences 122:e2503668122.

Mini-review: crop folate enhancement.

Kyei-Badu, B., and Giovannoni, J.  The Journal of Horticultural Science and Biotechnology:1-13.

White LED light affects flavor and nutritional quality of harvested apricot fruit.

Bai, C., Zuo, J., Watkins, C. B., Tao, J., Wang, Y., Jing, Z., Jiang, Y., Sun, H., Wu, C. e., and Zheng, Y. 2025.  Postharvest Biology and Technology 230:113797.

Spatially explicit heteroskedastic modeling for the Soil Health Assessment Protocol and Evaluation version 1.0S.

Veum, K. S., Parker, P. A., Holan, S. H., Pais, N. V., Wills, S. A., Amsili, J. P., Nunes, M. R., van Es, H. M., Seybold, C. A., and Karlen, D. L. 2025.  Soil Science Society of America Journal 89:e70065.

Global Patterns and Drivers of Soil Extracellular Enzyme Activities in Response to Plant Invasion: A Meta-Analysis.

Chen, X., Chen, J., Le Roux, J. J., van Kleunen, M., van Groenigen, K. J., Fang, L., Hu, D., Fan, T., Liu, Y., Su, L., Luo, Y., Cao, J., Zhou, Y., Sinsabaugh, R. L., and Luo, M. 2025.  Global Ecology and Biogeography 34:e70084.

 Inorganic N fertilization reduces soil organic carbon in bamboo forests in China.

Zheng, W., Xu, X., Xu, C., Ju, C., Li, Q., Liu, W., Luo, Y., Du, H., and Chen, X. 2025. Frontiers of Earth Science.

Phased chromosome-level assembly provides insight into the genome architecture of hexaploid sweetpotato.

Wu, S., Sun, H., Zhao, X., Hamilton, J. P., Mollinari, M., Gesteira, G. D. S., Kitavi, M., Yan, M., Wang, H., Yang, J., Yencho, G. C., Buell, C. R., and Fei, Z. 2025. Nature Plants.

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