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Discovery that Connects

Science-based innovation for a changing world

Recent publications from the SIPS community – June 30, 2022

The Practical Haplotype Graph, a platform for storing and using pangenomes for imputation.

Bradbury, P. J., Casstevens, T., Jensen, S. E., Johnson, L. C., Miller, Z. R., Monier, B., Romay, M. C., Song, B., and Buckler, E. S. 2022. Bioinformatics.

Loss of function of the bHLH transcription factor Nrd1 in tomato enhances resistance to Pseudomonas syringae.

Zhang, N., Hecht, C., Sun, X., Fei, Z., and Martin, G. B. 2022.  Plant Physiology.

The Potyviral Protein 6K1 Reduces Plant Proteases Activity during Turnip mosaic virus Infection.

Bera, S., Arena, G. D., Ray, S., Flannigan, S., and Casteel, C. L. 2022.  Viruses 14:1341.

Quantification of the effect of loess admixture on soil hydrological properties in sandy slope deposits.

Yang, F., Rossiter, D. G., He, Y., Karius, V., Zhang, G.-L., and Sauer, D. 2022.  Journal of Hydrology 610:127904.

Soil mapping today: computer-generated predictive soil maps – their role in soil survey and land evaluation.

Rossiter, David G. 2021. Agriculture for Development. (44):26-31.

“Connecting With Good People and Good Plants”: Community Gardener Experiences in New York State During the COVID-19 Pandemic.

Falkowski, T. B., Jorgensen, B., Rakow, D. A., Das, A., Diemont, S. A. W., Selfa, T., and Arrington, A. B. 2022.  Frontiers in Sustainable Food Systems 6.

Time Outdoors in Nature to Improve Staff Well-Being: Examining Changes in Behaviors and Motivations among University Staff in the Use of Natural Outdoor Environments since the Emergence of the COVID-19 Pandemic.

Loebach, Janet, Donald A. Rakow, Genevieve Meredith, and Mardelle Shepley. 2022.  Frontiers in Psychology

Maize resistance to insect herbivory is enhanced by silencing expression of genes for jasmonate-isoleucine degradation using sugarcane mosaic virus.

Chung, S. H., Zhang, S., Song, H., Whitham, S. A., and Jander, G. 2022.  Plant Direct 6:e407.

The diversity of quinoa morphological traits and seed metabolic composition.

Tabatabaei, I., Alseekh, S., Shahid, M., Leniak, E., Wagner, M., Mahmoudi, H., Thushar, S., Fernie, A. R., Murphy, K. M., Schmöckel, S. M., Tester, M., Mueller-Roeber, B., Skirycz, A., and Balazadeh, S. 2022. Scientific Data 9:323.

Graph pangenome captures missing heritability and empowers tomato breeding.

Zhou, Y., Zhang, Z., Bao, Z., Li, H., Lyu, Y., Zan, Y., Wu, Y., Cheng, L., Fang, Y., Wu, K., Zhang, J., Lyu, H., Lin, T., Gao, Q., Saha, S., Mueller, L., Fei, Z., Städler, T., Xu, S., Zhang, Z., Speed, D., and Huang, S. 2022.  Nature 606:527-534.

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