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Discovery that Connects

From fundamental insights to better plants, sustainably grown, serving the world

Recent publications from the SIPS community – April 4, 2019

Identification and Frequencies of Endophytic Microbes within Healthy Grape Berries.

Hall, M.E., and Wilcox, W.F. 2018. American Journal of Enology and Viticulture. 2018.18033.

Recombination contributes to population diversification in the polyploid intestinal symbiont Epulopiscium sp. type B.

Arroyo, F.A., Pawlowska, T.E., Choat, J.H., Clements, K.D., and Angert, E.R. 2019.  The ISME Journal 13:1084-1097.

Validation of Yield Component Traits Identified by Genome-Wide Association Mapping in a tropical japonica × tropical japonica Rice Biparental Mapping Population.

Eizenga, G.C., Jia, M.H., Jackson, A.K., Boykin, D.L., Ali, M.L., Shakiba, E., Tran, N.T., McCouch, S.R., and Edwards, J.D. 2019. The Plant Genome 12.

Genome-Wide Association and Genomic Prediction Models of Tocochromanols in Fresh Sweet Corn Kernels.

Baseggio, M., Murray, M., Magallanes-Lundback, M., Kaczmar, N., Chamness, J., Buckler, E.S., Smith, M.E., DellaPenna, D., Tracy, W.F., and Gore, M.A. 2019. The Plant Genome 12.

Association mapping in common bean revealed regions associated with Anthracnose and Angular Leaf Spot resistance.

Fritsche-Neto, R., Souza, T.L.P.O.d., Pereira, H.S., Faria, L.C.d., Melo, L.C., Novaes, E., Brum, I.J.B., and Jannink, J.-L. 2019. Scientia Agricola 76:321-327.

The genetic architecture of teosinte catalyzed and constrained maize domestication.

Yang, C.J., Samayoa, L.F., Bradbury, P.J., Olukolu, B.A., Xue, W., York, A.M., Tuholski, M.R., Wang, W., Daskalska, L.L., Neumeyer, M.A., Sanchez-Gonzalez, J.d.J., Romay, M.C., Glaubitz, J.C., Sun, Q., Buckler, E.S., Holland, J.B., and Doebley, J.F. 2019.  Proceedings of the National Academy of Sciences 116:5643-5652.

Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence.

Washburn, J.D., Mejia-Guerra, M.K., Ramstein, G., Kremling, K.A., Valluru, R., Buckler, E.S., and Wang, H. 2019. Proceedings of the National Academy of Sciences 116:5542-5549.

Ligands representing important functional groups of natural organic matter facilitate Fe redox transformations and resulting binding environments.

Bhattacharyya, A., Schmidt, M.P., Stavitski, E., Azimzadeh, B., and Martínez, C.E. 2019. Geochimica et Cosmochimica Acta 251:157-175.

Sequencing-Based Bin Map Construction of a Tomato Mapping Population, Facilitating High-Resolution Quantitative Trait Loci Detection.

Gonda, I., Ashrafi, H., Lyon, D.A., Strickler, S.R., Hulse-Kemp, A.M., Ma, Q., Sun, H., Stoffel, K., Powell, A.F., Futrell, S., Thannhauser, T.W., Fei, Z., Van Deynze, A.E., Mueller, L.A., Giovannoni, J.J., and Foolad, M.R. 2019. The Plant Genome 12.

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