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Publications

Below is a list of publications (journal articles, abstracts, popular press) funded or partially funded by this award for Years 1-5, September 1, 2014 through August 31, 2019.

Alyokhin, A. 2015. Preventing the Spread of Potato Viruses: What Insecticides Can and Cannot Do. Webinar presented for the Pest Management Network, available at http://www.plantmanagementnetwork.org/edcenter/seminars/potato/PotatoViruses/

Alyokhin, A. 2015. Managing non-persistently transmitted aphid-borne viruses: Perceptions and reality. Symposium “Beyond Corn and Soybeans…Challenges to Integrated Pest Management in Specialty Crops.” Annual Meeting of the Entomological Society of America, Minneapolis, MN. November 15-18, 2015. (abstract)

Alyokhin, A. 2015. Con- and heterospecific influences on potato colonization by three species of aphids. Annual Meeting of the Entomological Society of America, Minneapolis, MN. November 15-18, 2015. (abstract)

Alyokhin, A. 2017. Ecological pest management for potatoes. New England Vegetable & Fruit Conference and Trade Show, Manchester, NH (abstract)

Alyokhin, A. and A. Buzza. 2016. Epidemiology of Potato Virus Y in Northern Maine. Northeastern Plant, Pest, and Soils Conference, Philadelphia, PA. January 3-7, 2016. (abstract)

Alyokhin, A., S. Bag, J. Dill, J. Dwyer, K. Frost, R. Groves, S. Rondon, E. Wenninger, D. Lagos-Kutz, and C. Benedict. 2017. Multistate effort to understand aphid diversity and PVY spread in potatoes in the United States. Entomological Society of America Annual Meeting. November 5-8, Denver, CO. (abstract and poster)

Andros, Marcus. 2017. The Effects of Potato Virus Y Strains on Quality of Four Potato (Solanum tuberosum L.) Varieties in Storage. University of Idaho M.S. thesis.

Andros, M., N. Olsen, A. Karasev, K. Frost and C. Funke. 2018. The Effects of Potato Virus Y Strains on Quality of Four Potato Varieties in Storage. American Journal of Potato Research 95(3) 208 doi.org/10.1007/s12230-018-9650-4 (abstract)

Andros, M., N. Olsen, L. Woodell, A. Karasev, and K. Frost. The Effects of In-Season Potato Virus Y Infection on Quality of Four Potato (Solanum tuberosum L.) Varieties in Storage. American Journal of Potato Research (in preparation)

Babujee, L., Witherell, R. A., Mikami, K., Charkowski, A. O., Aiuchi, D., Rakotondrafara, A. M. 2019. Optimization of an isothermal recombinase polymerase amplification method for real-time detection of Potato virus Y O and N types in potato. Journal of Virological Methods, 267, 16-21.

Bag, S., Frost, K., Rondon, S.I., Charlton, B.A., and D. Walenta. 2016. Variation in aphid abundance and Potato virus Y incidence in Oregon potato. APS Annual Meeting. July 30- Aug 3, Tampa, FL. Phytopathology 106 (Suppl. 4) S4.44 (abstract)

Bag, S., S.I. Rondon, K. Frost, D. Walenta, and B. Charlton. 2016. Monitoring aphids in seed and commercial potato fields in Oregon. In 75th annual Pacific Northwest Insect Management Conference. Jan 11-12. Portland, OR. Section V: 59-62. (abstract)

Bag, S., Rondon, S., Frost, K., Walenta, D. and B. Charlton. 2016. Monitoring aphids and potato virus Y in seed and commercial fields in Oregon. XXV International Congress of Entomology, September 25-30, Orlando, FL, USA. (abstract)

Beissinger, A. 2016. Proactive approaches for managing Potato virus Y in western Washington. M.S. Thesis, WSU Plant Pathology Department, Pullman, WA (136 pages).

Beissinger, A., Benedict, C.A., Goldberger, J., and Inglis, D.A. 2016. A sociological assessment of Potato virus Y in western Washington: Barriers and bridges to adopting new management practices. Ann. Mtg. Amer. Phytopath. Soc., S106:S4.119. July 30- Aug 3, Tampa, FL (abstract and poster presentation)

Beissinger, A., Goldberger, J.R., Benedict, C.A., and Inglis, D.A. 2017. Seed potatoes, virus management, and the non-adoption of an agricultural innovation. Rural Sociology: doi:10.1111/ruso.12181

Beissinger, A. and Inglis, D. March 2018. Greenhouse comparison of two detection methods for Potato virus YN-Wi at four potato growth stages. Plant Health Progress (19):71-75.

Beissinger, A., Benedict, C., and Inglis, D. 2018. Alternative sources of Potato virus Y in western Washington. WSU Extension Technical Bulletin: 49E. 25 p.

Benedict, C., and Inglis, D. 2018. Potato virus Y: What you need to know. A Whatcom Co. Extension brochure – also on-line:
http://whatcom.wsu.edu/ag/edu/whpb/documents/PVYGardenStoreHandout_3.pdf

Benedict, C., McMoran, D., Inglis, D., and Karasev, A.V. 2015. Tuber symptoms associated with recombinant strains of Potato virus Y in specialty potatoes under northwestern Washington growing conditions. Amer. J. of Potato Res. 92: 593-602.

Bittara, F. G., Robinson, A. P., and Gudmestad, N. C. 2018. Powdery Scab of Potatoes. ND
Extension Circular PP1891. 4pp.

Boyd, E., Carpenter, E., Ross, B.T., Zidack, N., and Flenniken, M.L. 2018. Potato Cultivar and Seed Type Affect the Development of Systemic Potato virus Y (PVYN-Wi) Infection. American Journal of Potato Research Vol 95:2. Pp 183-190.

Bradford, B.Z., Chapman, S.A., Crubaugh, L.K. and Groves, R.L. 2018. Evaluation of Registered and Experimental Foliar Insecticides for the Control of Potato Aphid in Potato. Arth. Mgmt, 44. http://dx.doi.org/10.1094/PDIS-01-18-0054-RE.

Brown, Chuck, Potato EXPO “Breeding for resistance to Corky Ringspot.” Las Vegas, NV, January 12, 2016.

Buzza, A. 2018. PVY and Dandelions. 2018 Maine Potato Conference. University of Maine at Presque Isle (abstract).

Carroll, J.S., Gray, S.M., and Karasev, A.V. 2015. Screening potato cultivars for new sources of resistance to Potato virus Y. American Journal of Potato Research 92: 38-48.

Carroll, J.E., Smith, D.M., and Gray, S. M. 2016. Preferential acquisition and inoculation of PVYNTN over PVYO in potato by the green peach aphid Myzus persicae (Sulzer). J. Gen. Virol. 97: 797–802.

Cating, R. A., C.N. Funke, N. Kaur, P.B. Hamm, and K.E. Frost, 2015. A multiplex reverse transcription (RT) high-fidelity PCR protocol for the simultaneous detection of six viruses that cause potato tuber necrosis. American Journal of Potato Research 92:536-540.

Charkowski, A. O. 2017. The socioeconomic impact of emerging and re-emerging disease epidemics. Phytopathology 107 (12):161

Charkowski, A. O. 2018. An overview of challenges and changes in potato production and potato diseases in the United States and Canada. Phytopathology 108 Issue: 10 Supplement: S (abstract)

Charkowski, A.O., Gray, S., Groves, R., Westra, A. and Kreitinger, M. 2019. Top 10 questions when buying certified seed. Cover story in Potato Country Magazine. November 2019. Pp. 6-8.

Chikh-Ali, M., Rowley, J.S., Kuhl, J.C., Gray, S.M., and Karasev, A.V. 2014. Evidence of a monogenic nature of the Nz gene conferring resistance against Potato virus Y strain Z (PVYZ) in potato. American Journal of Potato Research 91: 649-654.

Chikh-Ali, M., Alruwaili, H., Vander Pol, D., and Karasev, A.V. 2015. Molecular characterization of recombinant strains of Potato virus Y from Saudi Arabia. Phytopathology 105 (Suppl. 4): S4.29 (abstract)

Chikh-Ali, M., Alruwaili, H., Vander Pol, D., and Karasev, A.V. 2016. Molecular characterization of recombinant strains of Potato virus Y from Saudi Arabia. Plant Disease 100: 292-297.

Chikh-Ali, M., Bosque-Pérez, N.A., Vander Pol, D., Sembel, D., and Karasev, A.V. 2016. Characterization of recombinant Potato virus YNTN (PVYNTN) isolates from Sulawesi, Indonesia. Phytopathology 106 (Suppl. 12): S4.44 (abstract)

Chikh-Ali, M., Bosque-Perez, N., Vander Pol, D., Sembel, D., and Karasev, A.V. 2016. Occurrence and molecular characterization of recombinant Potato virus YNTN (PVYNTN) isolates from Sulawesi, Indonesia. Plant Disease 100: 269-275.

Chikh-Ali, M., Naidu, R., and Karasev, A.V. 2016. First report of Potato virus Y (PVY) strain PVYC associated with a tomato disease in Kenya. Plant Disease 100:864.

Chikh-Ali, M., Vander Pol, D., Nikolaeva, O.V., Melzer, M.J., and Karasev, A.V. 2016. A novel strain of Potato virus Y from tomato. Phytopathology 105 (Suppl. 4): S4.29 (abstract).

Chikh-Ali, M., Vander Pol, D., Nikolaeva, O.V., Melzer, M.J., and Karasev, A.V. 2016. Biological and molecular characterization of a tomato isolate of Potato virus Y (PVY) of the PVYC lineage. Archives of Virology 161: 3561–3566.

Chikh-Ali, M. and Karasev, A.V. 2019. Development of a standardized greenhouse assay to visualize and score the potato tuber necrotic ringspot disease caused by recombinants of Potato virus Y in potato cultivar Yukon Gold. Abstracts of Papers Presented at the 102nd Annual Meeting of the Potato Association of America, Boise, ID, USA July 22 – 26, 2018. Am. J. Potato Res. 96: 317-318.

Chikh-Ali, M., Rodriguez-Rodriguez, M., Green, K.J., Kim, D.-J., Chung, S.-M., Kuhl, J.C, and Karasev, A.V. 2018. Identification and molecular characterization of recombinant Potato virus Y (PVY) in potato from Korea, PVYNTN strain. Plant Disease: published on-line July 17, 2018 http://dx.doi.org/10.1094/PDIS-05-18-0715-RE.

Chikh-Ali, M., Rodriguez-Rodriguez, M., Green, K.J., Kim, D.-J., Chung, S.-M., Kuhl, J.C, and Karasev, A.V. 2019. Identification and molecular characterization of recombinant Potato virus Y (PVY) in potato from Korea, PVYNTN strain. Plant Disease 103: 137-142 (http://dx.doi.org/10.1094/PDIS-05-18-0715-RE)

Chikh-Ali, M., Tran, L.T., Price, W.J., and Karasev, A.V. 2019. Effects of the age-related resistance to Potato virus Y in potato on the systemic spread of the virus, incidence of the potato tuber necrotic ringspot disease, tuber yield, and translocation rates into progeny tubers. Plant Disease 103: published on-line August 14, 2019 (http://dx.doi.org/10.1094/PDIS-06-19-1201-RE).

Claflin, S. Hernandez, N., Groves, R., Thaler, J. and Power, A. 2019. Intra-annual variation and landscape composition interactively affect aphid community composition. https://doi.org/10.1002/ecs2.2710. Ecosphere 10(5):e02710. 10.1002/ecs2.2710.

Coombs, J. Douches, D., Yellareddygari, S.K.R., Gudmestad, N. C., Novy, R., and Whitworth, J. 2018. Genetic markers for potato mop top and tobacco rattle virus (PMTV and TRV) resistance in a tetraploid russet mapping population. Potato Association of America annual meeting. July 23, 2018. Boise, ID (abstract)

Coombs, J., David Douches, S.K.R. Yellareddygari, Neil C. Gudmestad, Richard Novy, and Jonathan Whitworth. 2019. Genetic Markers For Potato Mop Top And Tobacco Rattle Virus (PMTV and TRV) Resistance In A Tetraploid Russet Mapping Population. Potato Association of America. Winnipeg, CA. (abstract)

Couture, J. J. 2015. Mapping variation in vegetation functioning using imaging spectroscopy (Invited), American Geophysical Union (AGU) Fall Meeting. Dec. 18, 2015. (abstract)

Couture J., Singh A., Charkowski A., Groves R., Gray S., Bethke P., and Townsend P. 2018. Integrating spectroscopy with potato disease management. Plant Dis. 102 (11): 2233-2240. http://doi.org/10.1094/PDIS-01-18-0054-RE

daSilva, W., Ingram, J., Hackett, C.A., Coombs, J.J., Douches, D., Bryan, G., DeJong, W., and Gray. S.M. 2017. Mapping Loci that Control Tuber and Foliar Symptoms Caused by PVY in Autotetraploid Potato (Solanum tuberosum L.), G3: Genes, Genomes, Genetics (Bethesda) 2017 Nov 6;7(11):3587-3595. doi: 10.1534/g3.117.300264

Domfeh, O., Bittara, F., and Gudmestad, N.C. 2015. Sensitivity of potato cultivars to Potato Mop Top virus-induced tuber necrosis. Plant Dis. 99:788-796.

Domfeh, O., Thompson, A.L. and Gudmestad, N.C. 2015. Sensitivity to tuber necrosis caused by Potato Mop Top virus in advanced potato (Solanum tuberosum L.) breeding selections. Amer. J. Potato Res. 92:636-647.

Domfeh, O. and Gudmestad, N.C. 2016. Effect of soil moisture on the development of
Potato Mop Top virus-induced tuber necrosis. Plant Dis. 100:418-423.

Dwyer, J. D. 2015. Aphid Populations in 2014. Spudlines, Volume 50 Number 3.

Dwyer, J. D. 2015. When is the Best Time to Initiate PVY/Aphid Management Strategies. Spudlines, Volume 50 Number 3.

Dwyer, James, D., Dwyer, Marc. J. 2018. What We Have Learned About Aphids in the Last Five Years. Maine Potato Conference January 17-18, 2018. University of Maine at Presque Isle (abstract)

Dwyer, J., Dwyer, M., Alyokhin, A., Dill, J., Buzza, A. 2018. Aphid Tower Trapping Results in Maine. 9th International IPM Symposium. Baltimore, Maryland (abstract)

Elwan, E.A., Abdel Aleem, E.E., Fattouh, F.A., Green, K.J., Tran, L.T., and Karasev, A.V. 2017. Occurrence of diverse recombinant strains of Potato virus Y circulating in potato fields in Egypt.
Plant Disease 101: 1463-1469 (http://dx.doi.org/10.1094/PDIS-02-17-0275-RE)

Frost, K.E., Gevens, A.J. and Groves, R.L. 2015. Web-based pest and disease forecasting tool for enhanced processing vegetable crop management. In Proceedings of the 2015 Wisconsin Crop Management Conference Abstracts, January, 13-15, Alliant Energy Center, Madison, WI. (abstract) YES

Fulladolsa Palma, Ana Cristina. 2015. Management of Potato virus Y in potato. PhD diss., University of Wisconsin-Madison.

Fulladolsa, A. C., F. M. Navarro, R. Kota, K. Severson, J. P. Palta, and A. O. Charkowski. 2015. Application of marker assisted selection for Potato virus Y resistance in the University of Wisconsin Potato Breeding Program. American Journal of Potato Research 92 (3): 444-450.

Fulladolsa, A.C., Jansky, S.H., Halterman, D.A., Charkowski, A.O. 2015. Identification and evaluation of SNP and SCAR markers linked to the Rychc gene for resistance to Potato virus Y in diploid potato populations. 2015 APS Annual Meeting, Pasadena, CA, USA.

Fulladolsa, A., Jansky, S., Halterman, D., Charkowski, A. 2016. Development of molecular markers tightly linked to Potato virus Y resistance gene Rychc in a diploid potato population. Phytopathology 106 (12):14 (abstract)

Fulladolsa, A. C., Jansky, S. H., Smith, D. R., Abramczak, C. M., Charkowski, A. O. 2017.
Development and evaluation of four molecular markers tightly linked to the Potato virus Y resistance gene Ry(chc) in diploid potato populations. Phytopathology 107 (12): 69 (abstract)

Fulladolsa, A.C., La Plant, K.E., Groves, R.L., Charkowski, A. 2018. Potato plants grown from minitubers are delayed in maturity, but are not more susceptible to Potato virus Y than plants grown from conventional seed. American Journal of Potato Research 95 (1): 45-53.

Fulladosa, A.C., Zeng, Y. and Charkowski, A.O. 2018. Evaluation of chemical soil treatment and cultivar on the incidence of powdery scab and Potato mop-top virus in potato. Phytopathology 108 (10): 177. Supplement S.

Fulladolsa, A. C., Charkowski, A. O., Cai, X., Whitworth, J., Gray, S., Jansky, S. 2019. Germplasm with Resistance to Potato virus Y Derived from Solanum chacoense: Clones M19 (39-7) and M20 (XD3). American Journal of Potato Research, 96(4), 390-395.
DOI: 10.1007/s12230-019-09719-6

Fuller, KB, CS McIntosh and N Zidack. “Valuing Disease Prevention in a Vegetatively Propagated Annual Crop: Benefits from the Montana Seed Potato Certification Program” revision returned to Plant Disease

Funke, C., Frost, K., Olsen, N., and A.V. Karasev. 2016. Strain specific resistance to Potato virus Y (PVY) in potato efficiently reduces the prevalence of the PVYO strain under semi-field conditions. Phytoplathology 106 (Suppl. 4) S4.199.

Funke, C.N., Frost, K.E., N. Olsen and A.V. Karasev. 2017. Strain-specific resistance to PVY in potato and its effect on prevalence of PVY strains in the field. Abstract 38. The 101st annual meeting of the Potato Association of America, July 23-27, Fargo, ND. (abstract)

Funke, C.N., Nikolaeva, O.V., Green, K.J., Tran, L.T., Chikh-Ali, M., Quintero-Ferrer, A., Cating, R., Frost, K.E., Hamm, P.B., Olsen, N., Pavek, M.J., Gray, S.M., Crosslin, J.M., and Karasev, A.V. 2017. Strain-specific resistance to Potato virus Y (PVY) in potato and its effect on the relative abundance of PVY strains in commercial potato fields. Plant Disease 101: 20-28.

Galimberti, A., A. Alyokhin, and H.C. Qu. 2017. Relative importance of initial inoculum and transmission efficiency by aphid vectors in spread of Potato Virus Y. Annual Meeting of the Entomological Society of America, Denver, CO. (abstract and poster).

Gal-On, A., Fuchs, M., and Gray, S.M. 2017. Generation of novel resistance genes using mutation and targeted gene editing. Current Opinion in Virology. 26:98-103

Glais, L., Chikh-Ali, M., Karasev, A.V., Kutnjak, D., and Lacomme, C. 2017. Detection and diagnosis of PVY. In: Lacomme, C., Glais, L., Bellstedt, D.U., Dupuis, B., Karasev, A.V., and Jacquot, E., editors. Chapter 5. Potato virus Y: biodiversity, pathogenicity, epidemiology and management. Springer: Cham, Switzerland; pp. 103-139.

Gray, S.M., Karasev, A., and Whitworth, J. 2016. Evolving disease dynamics of the Potato virus Y complex affecting the US potato crop: A group effort between selection pressures and farming practices. 16th Meeting of the Virology Section of the European Assoc. of Potato Research, Ljubljana, Slovenia (abstract)

Gray, S.M., Karasev, A., and Whitworth, J. 2016. Evolving disease dynamics of the Potato virus Y complex affecting the US potato crop: A group effort between selection pressures and farming practices.13th International Plant Virus Epidemiology Symposium, Avignon, France.

Gray, S. and Power, A. 2018. Anthropogenic influences on emergence of vector-borne plant viruses: the persistent problem of Potato virus Y. Current Opinion in Virology (33): 177-183.

Green, K.J., Brown, C.J., Gray, S.M., and Karasev, A.V. 2017. Phylogenetic study of recombinant strains of Potato virus Y. Virology 507: 40-52. .

Green, K.J., Chikh-Ali, M., Hamasaki, R.T., Melzer, M.J., and Karasev, A.V. 2017. Potato virus Y (PVY) isolates from Physalis peruviana are unable to systemically infect potato or pepper and form a distinct new lineage within the PVYC strain group. Phytopathology 107: 1433-1439 (http://dx.doi.org/10.1094/PHYTO-04-17-0147-R). – Fig. 1 of this paper was featured on the cover of the November 2017 issue of Phytopathology.

Green, K.J., Brown, C.J., and Karasev, A.V. 2018. Genetic diversity of Potato virus Y (PVY): sequence analyses reveal ten novel PVY recombinant structures. Archives of Virology 163: 23-32 (http://dx.doi.org/10.1007/s00705-017-3568-x).

Groves, R.L., Insect Pest Management Review – 2017: And a Look Ahead to 2018. Badger Common Tater magazine, The Badger Beat, January 2018 Issue.

Groves, R.L. 2018. Prediction of aphid flights and timing of management. In Proceedings of the 2017 Wisconsin Certified Seed Potato Program, Annual Meeting Abstracts, January 25, 2018, Antigo, WI http://www.potatoseed.org/.

Groves, R.L., Frost. K.E. and Huseth, A.S. 2014. Integrating grower-driven and publically held data for improved plant protection. In Proceedings of the 2014 Joint Meeting of the American Phytopathological Society & The Mycological Society of America (APS-CPS 2014), Annual Meeting Abstracts, Phytopathology 104:S3. pp.159. (abstract)

Groves, R.L. Charkowski, A.O. and Bethke, P. 2015. Influence of viral stresses on potato storage quality. In Proceedings of the 2015 University of Wisconsin – Wisconsin Potato and Vegetable Growers, Grower Education Conference , UW- Madison College of Agriculture and Life Sciences, Research Division and UWEX, Feb. 3-5, Steven’s Point, WI, 22:1pp. (abstract)

Groves, R.L., Frost, K.E., Charkowski, A.O., Duerr, E., Huseth, A.S. and Crockford, A.B. 2015. Data Driven IPM: Accurate Predictions of Risk for Plant Protection. P-IE Section Symposium, Insecticide Resistance Management (IRM) vs. Integrated Pest Management (IPM): Overlap and Conflicts, IRAC US Symposium Series No. 11. Entomological Society of America Annual Meeting, Minneapolis, MN, November 15-18, 2015. (abstract)

Groves, R.L., Frost, K.E. and Huseth, A.S. 2015. Modeling Potato virus Y incidence in seed potato production using grower-driven data and landscape analyses. In Proceedings of the 2015 AFRI NIFA Sponsored Workshop: Enhancing Risk Index-Driven Decision Tools for Managing Insect Transmitted Plant Pathogens, Conference Abstracts, May 14-16, Asilomar Conference Grounds, Pacific Grove, CA. (http://ucanr.edu/sites/tospo/). (abstract)

Groves, R.L., Frost, K.E., and A. Charkowski. 2016. Grower-driven data reveals first principles in the management of Potato virus Y incidence in seed potato production. XXV International Congress of Entomology, Orlando, FL, September 25-30. DOI: 10.1603/ICE.2016.93731 (conference paper)

Groves, R.L. Clements, J., Garcia, M. and Frost, K. 2017. Vector-borne diseases in the UK & US: common threats and shared solutions. BBSRC UK-US Joint Meeting, Davis, CA. October 18, 2017.

Gundersen, B., Inglis, D.A., Pavek, M.J., and Karasev, A.V. 2019. Foliar and tuber reactions of three strains of Potato virus Y on five fresh market potato cultivars through three successive potato generations. American Journal of Potato Research, accepted pending revision.

Huang, D. and Yan, G. P. 2016. Real-time and conventional PCR assays for identifying the stubby root nematode Paratrichodorus allius. American Phytopathological Society Annual Meeting, Tampa, FL, July 30-August 3, 2016. (abstract)

Huang, D., Yan, G. P., Plaisance, A., Gudmestad, N. C., Whitworth, J., Frost, K., Brown, C. R., Hafez, S. L., Handoo, Z. A., and Skantar, A. M. 2017. Molecular detection, identification and quantification of Paratrichodorus allius from nematode individuals, communities and soil DNA. Abstracts of 56th Annual Meeting of the Society of Nematologists, Williamsburg, Virginia, August 13-16. Pp 70-71. (abstract)

Huang, D., Yan, G. P., and Skantar, A. M. 2017. Quantification of Paratrichodorus allius in DNA extracted from soil using TaqMan Probe and SYBR Green real-time PCR assays. Nematology 19: 987-1001.

Huang, D., Yan, G. P., and Skantar, A. M. 2017. Development of real-time and conventional PCR assays for identifying stubby root nematode Paratrichodorus allius. Plant Disease 101:964-972.

Huang, D., Yan, G., Gudmestad, N.C., Whitworth, J., Frost, K., Brown, C., Weimin, Y., Agudelo, P. and Crow, W. 2018. Molecular characterization and identification of stubby root nematode species from multiple states in the United States. Plant Dis. 102 (11): 2101-2111
https://doi.org/10.1094/PDIS-10-17-1668-RE

Huang, D., Yan, G. P., Gudmestad, N., and Whitworth, J.L. 2019. Assessment of factors
associated with molecular quantification of stubby root nematode Paratrichodorus allius from field soil DNA. Plant Dis. 103: 3265-3273. doi.org/10.1094/PDIS-12-18-2240-RE.

Huang, D., Yan, G. P., Gudmestad, N.C., Ye, W., Whitworth, J., Frost, K., Crow, W., Hajihassani, A. 2019. Developing a one-step multiplex PCR assay for rapid detection of four stubby-root nematode species Paratrichodorus allius, P. minor, P. pororus and Trichorodorus obtusus. Plant Dis.103: 404-410. https://doi.org/10.1094/PDIS-06-18-0983-RE

Inglis, D.A. and Gundersen, B. 2015. Impact of Potato virus Y on the quality of specialty potato tubers. Pg. 7-14 in Proceedings of the Washington-Oregon Potato Conference. January 27-29, Kennewick, WA. (abstract)

Inglis, D.A. 2016. ‘Cracked’ potato tubers and Potato virus Y. Invited PAA Forum article, Spudman magazine, June 2016.

Inglis, D., Cracking down on PVY. Potato Country Magazine. Cover story September/October edition 2018 pp, 8-10.

Inglis, D.A., Gundersen, B., and Beissinger, A. 2016. Evidence that tuber cracking in potato can be caused by Potato virus Y. Ann. Mtg. Pacific Div. Amer. Phytopathol. Soc. 106:S4.199, La Conner, WA (abstract and poster presentation)

Inglis, D.A., Gundersen, B., Beissinger, A., and Karasev, A.V. 2017. Foliar and tuber reactions of five fresh market potato cultivars with three Potato virus Y strains. Ann. Mtg. Amer. Phytopath. Soc., Phytopathology 107:S5.74, San Antonio, TX (abstract for poster presentation)

Inglis, D., Benedict, C., Gundersen, B., Beissinger, A., and McMoran, D. 2018. Proactive approaches for controlling recombinant strains of Potato virus Y in western Washington. WSU Extension Technical Bulletin: FS313E

Inglis, D.A., Gundersen, B., Beissinger, A., Benedict, C., and Karasev, A.V. 2019. Potato virus Y in seed potatoes sold at garden stores in western Washington: prevalence and strain composition. American Journal of Potato Research 96: 235-243 (http://dx.doi.org/10.1007/s12230-018-09695-3).

Jemison, J. 2018. Controlling Volunteer Potatoes in Rotation Crops. 2018 Maine Potato Conference. University of Maine at Presque Isle (abstract).

Karasev, A.V. 2015. A novel strain of Potato virus Y from tomato. 107th Annual Meeting of the American Phytopathological Society, August 3, 2015, Pasadena, CA (abstract)

Karasev, A.V. “Molecular characterization of recombinant strains of Potato virus Y from Saudi Arabia”, 107th Annual Meeting of the American Phytopathological Society, August 3, 2015, Pasadena, CA (poster)

Karasev, A.V. “A global overview of biological and molecular research on Potato virus Y”, R.E.F. Matthews Lecture, 12th Australasian Plant Virology Workshop, September 17, 2015, Fremantle, Western Australia (abstract)

Karasev, A.V. “Characterization of recombinant strains of Potato virus Y from seed potato in Saudi Arabia and in Indonesia”, 12th Australasian Plant Virology Workshop, September 18, 2015, Fremantle, Western Australia

Karasev, A.V. “Changes in the Potato virus Y strain composition in the U.S. potato and reactions of potato cultivars to different strains of the virus”. Invited talk, Western Australia Seed Potato Producers’ Meeting (30 attendees), September 21, 2015, Manjimup, Western Australia – invited by the Department of Agriculture of Western Australia.

Karasev, A.V. 2016. Changing epidemiology of Potato virus Y in potato, and the role of strain specific resistance in facilitating the spread of recombinant strains. Phytopathology 106 (Suppl. 12): S4.200 (abstract)

Karasev, A.V. (2017) Strain-specific resistance to Potato virus Y (PVY) in potato and its effect on the relative abundance of PVY strains in commercial potato fields. Plant Disease 101: 20-28 (http://dx.doi.org/10.1094/PDIS-06-16-0901-RE)

Karasev, A.V., Chikh-Ali, M., Bosque-Perez, N., Vander Pol, D., and Sembel, D. 2016. Characterization of recombinant Potato virus YNTN (PVYNTN) isolates from Sulawesi, Indonesia. Phytopathology 106 (Suppl. 12): S4.44 (abstract)

Karasev, A.V., Green, K.J., and Chikh-Ali, M. (2019) Low genetic diversity of recombinants
of Potato virus Y in the United States potato: a natural advantage for the potato producers. Abstracts of Papers Presented at the 102nd Annual Meeting of the Potato Association of America, Boise, ID, USA July 22 – 26, 2018. Am. J. Potato Res. 96: 340.

Kaur, N., Cating, R.A., Dung, J.K.S., Frost, K.E., Robinson, B.A., and P.B. Hamm. 2016. First report of Potato mop-top virus infecting potato in Oregon. Plant Disease 100:2337.

Klein, M.L. and S.I. Rondon. 2016. Spatial and temporal analysis of aphids in eastern Oregon. In 75th annual Pacific Northwest Insect Management Conference. 11-12 Jan. Portland, OR. Section V. Pp 62-64. (abstract)

Khassanov, V., Beisembina, B., Shevtsov, A., Amirgazin, A., Vologin, S., and Karasev, A.V. (2019) Occurrence of three recombinant strains of Potato virus Y in potato in Kazakhstan. Plant Disease 103: published on-line August 23, 2019 (http://dx.doi.org/10.1094/PDIS-03-19-0573-PDN).

Kuhl, J.C., R.G. Novy, J.L. Whitworth, M.S. Dibble, B. Schneider, and D. Hall. 2016. Development of Molecular Markers Closely Linked to the Potato Leafroll Virus Resistance Gene, Rlr etb, for use in Marker-Assisted Selection. American Journal of Potato Research 93:203-212.

Lacomme, C., Glais, L., Bellstedt, D.U., Dupuis, B., Karasev, A.V., and Jacquot, E., editors 2017. Potato virus Y: biodiversity, pathogenicity, epidemiology and management. Springer: Cham, Switzerland; a book with 9 chapters, 261pp.

McMoran, D.W., Benedict, C.A., and Inglis, D.A. 2018. Potato virus Y and organic potatoes in western Washington WSU Extension Fact Sheet: FS313E

Mallik, I. and Gudmestad, N.C. 2015. First report of Potato Mop Top virus causing potato tuber necrosis in Colorado and New Mexico. Plant Dis. 99:164.

Mallik, I., Fulladolsa, A.C., Yellareddygari, S.K.R., Bittara, F.G., Charkowski, A.O., and
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Mattupalli, C., Charkowski, A.O. 2019. Minituber production in greenhouses – Management of Diseases, Insects and Physiological Disorders. CSU Extension Fact Sheet 0.310.
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Mondal, S. and Gray, S. 2017. Strain specificity of helper components encoded by Potato virus Y. Phytopathology. Abstract 38-O. APS Annual Meeting August 5-9, 2017. San Antonio, TX.

Mondal, S., Gray, S.M. 2017. Sequential acquisition of Potato virus Y strains by Myzus persicae favors the transmission of the emerging recombinant strains. Virus Research 241:116-124.

Mondal, S. and Gray, S. 2019. Strain specific properties of Potato virus Y encoded helper components provide evidence for transmission bias of recombinant strains over the ordinary strain. (in preparation)

Mondal, M. and Gray, S.M. 2020. Virus and helper component interactions favor the transmission of recombinant potato virus Y strains. J. Gen Virol. (in preparation)

Mondal, S., E.J. Wenninger, P.J.S. Hutchinson, M.A. Weibe, S.D. Eigenbrode, and N.A. Bosque-Pérez. 2016. Contribution of noncolonizing aphids to Potato virus Y prevalence in potato in Idaho. Environmental Entomology 45:1445-1462.

Mondal, S., E.J. Wenninger, P.J.S. Hutchinson, J.L. Whitworth, D. Shrestha, S.D. Eigenbrode, and N.A. Bosque-Perez. 2016. Comparison of transmission efficiency of various isolates of Potato virus Y among three aphid vectors. Entomologia Experimentalis et Applicata 158:258-268

Mondal, S., Carroll, J. E., and Gray, S.M. 2016. Aphid transmission of multiple strains of Potato virus Y acquired either sequentially or from mixed infections. 16th Meeting of the Virology Section of the European Assoc. of Potato Research, Ljubljana, Slovenia

Mondal, S., Carroll, J. E., and Gray, S.M. 2016. Aphid transmission of multiple strains of Potato virus Y acquired either sequentially or from mixed infections. 13th International Plant Virus Epidemiology Symposium, Avignon, France.

Mondal, S., Lin, Y.H. and Gray, S.M. 2016. Potato cultivar and virus isolate affect the disease dynamics of mixed-strain infections of Potato virus Y. 16th Meeting of the Virology Section of the European Assoc. of Potato Research, Ljubljana, Slovenia

Mondal, S., Lin, Y.H. and Gray, S.M. 2016. Potato cultivar and virus isolate affect the disease dynamics of mixed-strain infections of Potato virus Y. 13th International Plant Virus Epidemiology Symposium, Avignon, France.

Mondal, S., Lin, Y.H., Carroll, J.E., Wenninger, E.J., Bosque-Perez, N.A., Whitworth, J.L., Hutchinson, P., Eigenbrode, S., Gray, S.M. 2017. Potato virus Y transmission efficiency from potato infected with single or multiple virus strains. Phytopathology 107:491-498.

Mondal, S., E.J. Wenninger, P.J.S. Hutchinson, J.L. Whitworth, D. Shrestha, S.D. Eigenbrode, N.A. Bosque-Pérez, and W.E. Snyder. 2017. Responses of Aphid Vectors of Potato leaf roll virus to Potato Varieties. Plant Disease 101:1812-1818.

Mondal, S., Ghanim, M., Roberts, A., and Gray, S. 2020. Potato virus Y strains co-localize and compete in single epidermal leaf cells and can co-occupy binding sites on aphid stylets. J. Gen. Virology (in review)

Moyo, L., Hamid, A., Mallik, I., Gudmestad, N.C., Gray, S.M., Pappu, H.R. 2018. Genetic diversity of tobacco rattle virus isolates from potato in the USA. International Congress of Plant Pathology, Boston Convention Center, Boston, MA. July 29-August 3, 2018. Phtopathology:108 (10): 84.

Novy, R., J. Whitworth, J. Stark. 2016. Breeding for resistance to Potato virus Y and protocols to mitigate PVY in breeder seed. American Journal of Potato Research 94:237

Novy, RG, Whitworth, JL, Stark, JC, Schneider, BL, Knowles, NR, Pavek, MJ, Knowles, LO, Charlton, BA, Sathuvalli, V, Yilma, S, Brown, CR, Thornton, M, Brandt, TL, Olsen, N. 2017. Payette Russet: a Dual-Purpose Potato Cultivar with Cold-Sweetening Resistance, Low Acrylamide Formation, and Resistance to Late Blight and Potato Virus Y. Am. J. Potato Research. 94:38-53.

Olsen, N. and A. Karasev. 2015. Going viral: discerning among common virus-induced diseases. Potato Grower Magazine 44(9):32. September 2015. http://www.potatogrower.com/2015/09/going-viral

Olsen, N., Woodell, L., Karasev, A., and Frost. K. 2019. Impact of seedborne PVY on commercial potato tuber yield. Annual meeting of the Potato Association of America, July 28-August 1, Winnipeg, Manitoba CA.

Olsen, N., L. Woodell, A. Karasev and N. Gudmestad. Impact of Potato Mop Top Virus on Potato Quality in Storage. American Journal of Potato Research (in preparation)

Pandey, B., Mallik, I., and Gudmestad, N.C. 2019. Development and application of a reverse transcription real-time PCR (RT-qPCR) assay for the direct detection of Potato mop top virus in soil. Annual meeting of the American Phytopathological Society, Cleveland, OH, August 3-7, 2019. (abstract)

Pandey, B., Mallik, I., and Gudmestad, N.C. 2020. Development and application of a reverse transcription real-time PCR (RT-qPCR) and droplet digital PCR (RT-ddPCR) assays for the direct detection of Potato mop top virus in soil. Phytopathology 110:
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Pavek, M.J., N.R. Knowles, Z.J. Holden. 2015. In-field testing to identify new potato varieties and best management practices for Washington growers. Washington State Potato Commission Progress Reports for Research Conducted in 2014.

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Pavek, M.J. and Z.J. Holden. 2017. Washington commercial seed lot trials. A summary of the 2017 Washington state commercial seed lot trial. Washington State University Special Report. 20 pages. http://potatoes.wsu.edu/

Pavek, M.J. and Z.J. Holden. 2017. Washington commercial potato seed lot and demonstration trials, in Northwest Potato Consortium Progress Reports for Research Conducted in 2016, 10 pages.

Pavek, M.J. and Z.J. Holden. 2018. Washington commercial potato seed lot and demonstration trials, in Northwest Potato Consortium Progress Reports for Research Conducted in 2017.

Pavek, M.J. and Z.J. Holden. 2018. Washington commercial seed lot trials. A summary of the 2018 Washington state commercial seed lot trial. Washington State University Special Report. 21 pages. http://potatoes.wsu.edu/

Plaisance, A. and Yan, G. P. 2015. Comparison of two nematode extraction techniques. 2015. 54th Annual Meeting of the Society of Nematologists, East Lansing, MI, July 19-24, 2015. (abstract)

Raikhy, G., Gray, S.M., Krueze, J. and Pappu, H.R. 2016. Global analysis of the migration pattern and evolutionary lineages of Potato virus Y. 16th Meeting of the Virology Section of the European Assoc. of Potato Research, Ljubljana, Slovenia. (abstract)

Raikhy, G., Gudmestad, N.C., Gray, S.M. and Pappu, H.R. 2016. Genetic diversity among Tobacco rattle virus populations in the US. 16th Meeting of the Virology Section of the European Assoc. of Potato Research, Ljubljana, Slovenia. May 31st to June 3rd 2016. (abstract)

Raikhy, G., Gudmestad, N.C., Gray, S.M. and Pappu, H.R. 2016. Genetic diversity among Tobacco rattle virus populations in the US. 13th International Plant Virus Epidemiology Symposium, Avignon, France. (abstract)

Raikhy, G., Gray, S.M., Krueze, J. and Pappu, H.R. 2016. Global analysis of the migration pattern and evolutionary lineages of Potato virus Y. 13th International Plant Virus Epidemiology Symposium, Avignon, France. (abstract)

Ramesh, S.V., G. Raikhy, C.R. Brown, J.L. Whitworth, and H.R. Pappu. 2014. Complete genomic characterization of a potato mop-top virus isolate from the United States. Archives of virology 159:3427-3433. DOI 10.1007/s00705-014-2214-0

Robinson, A., Domfeh, O., and Gudmestad, N. C. 2015. Potato Tuber Viruses: Mop-Top Management. ND Extension Circular A1777. 2pp. https://www.ag.ndsu.edu/publications/crops/potato-tuber-viruses-mop-top-management/a1777.pdf

Robinson, A., Yellareddygari, S.K.R., Domfeh, O., and Gudmestad, N. C. 2018. Potato Tuber Viruses: Mop-Top Management. ND Extension Circular A1777. 2pp. (revised)

Rondon. S.I., Bag, S., Vinchesi, A., Goyer, A. and K. Frost. 2016. PVY vectors, vector-plant interactions and novel control methods in the western United States. 16th triennial meeting of the virology section of the European Association of Potato Research, May 31 – June 3, Ljubljana, Slovenia. (abstract)

Rosenman, J. 2018. Seed Potato Certification and Potato Virus Y: An Economic Assessment. Master’s Thesis. Department of Agricultural Economics and Rural Sociology, University of Idaho.

Rosenman, J., Christopher S. McIntosh, Giri Raj Aryal, Phil Nolte. 2019, “Planting a Problem – Examining the Spread of Seed-Borne Potato Virus Y” Plant Disease, published on-line April 29, 2019: https://doi.org/10.1094/PDIS-11-18-2004-SR.

Rowley, J.S., Gray, S.M., and Karasev, A.V. (2015) Screening potato cultivars for new sources of resistance to Potato virus Y. American Journal of Potato Research 92: 38-48.

Shakir, N., Hameed, S., Karasev, A.V., and Zafar, Y. 2018. Occurrence of Potato virus Y (PVY) recombinants, strain PVYNTN, infecting tobacco in Pakistan. Plant Disease 102: 2385-2385 (http://dx.doi.org/10.1094/PDIS-03-18-0449-PDN)

Shrestha, D., E.J. Wenninger, P.J.S. Hutchinson, J.L. Whitworth, S. Mondal, S.D. Eigenbrode, and N.A. Bosque-Perez. 2014. Interactions among potato genotypes, growth stages, virus strains, and inoculation methods in the potato virus y and green peach aphid pathosystem. Environmental Entomology 43:662-671.

Stark, J.C., R.G. Novy, J.L. Whitworth, N.R. Knowles, M.J. Pavek, M. Thornton, C.R. Brown, B.A. Charlton, V. Sathuvalli, T.L. Brandt, N. Olsen, and S. Yilma. 2018. Pomerelle Russet: An early maturing potato variety with high yields of US No. 1 tubers suitable for fresh market and mid-storage processing and tolerance to Potato mop-top virus. American Journal of Potato Research 95:110-122.

Thomas-Sharma, S., Abdurahman, A., Ali, S., Andrade-Piedra, J. L., Bao, S., Charkowski, A. O., Crook, D., Kadian, M., Kromann, P., Struik, P. C., Torrance, L., Garrett, K.A., Forbes, G.A. 2016. Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries. Plant Pathology 65 (1):3-16.

Tran, L.T., Nikolaeva, O., and A.V. Karasev. 2017. Development of an immunocapture-reverse transcription (RT)-PCR methodology for detection of Potato mop-top virus in tuber and leaf tissue. Abstract 11, Annual Meeting of the Potato Association of America (abstract).

Tran, L.T., Funke, C.N., Nikolaeva, O.V., Green, K.J., Chikh-Ali, M., and Karasev, A.V. (2019) Prevalence of Potato virus Y strains in Idaho seed potato, 2013 to 2017. Abstracts of Papers Presented at the 102nd Annual Meeting of the Potato Association of America, Boise, ID, USA July 22 – 26, 2018. Am. J. Potato Res. 96: 355.

Weber, Erin L., James S. Busse, and Paul C. Bethke. 2019. Impact of in-season PVY infection on chipping potato yield and quality. Abstract for PAA annual meeting, Winnipeg, Manitoba, Canada.

Wenninger, E., A. Alyokhin, J. Dill, J. Dwyer, K. Frost, R. Groves, S. Rondon, and C. Benedict. 2016. Seasonal aphid captures in potato and implications for spread of potato virus Y. Potato Expo, Las Vegas, Nevada. January 12-14, 2016. (abstract)

Whitworth, Jonathan. 2016. Potato virus Y is an industry-wide problem; challenges in removing PVY from seed. American Journal of Potato Research 94:248 (abstract)

Woodell, L., N. Olsen, A. Karasev, and N. Gudmestad. 2019. Impact of potato mop top virus on potato in storage. American Journal of Potato Research (abstract)

Yan, G. P. 2019. Molecular characterization and identification of Trichodorid nematode species from multiple states in the USA. Page 21 in Abstract Book of International Conference on Plant Science Research, Baltimore, MD, USA, March 04-06 (abstract)

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Yan, G. P. and Gudmestad, N.C. 2015. Stubby root nematode as the virus vector of corky ringspot disease of potato. 54th Annual Meeting of the Society of Nematologists, East Lansing, MI, July 19-24, 2015. (abstract)

Yan, G. P. and Huang, D. 2019. Evaluation of factors associated with real-time PCR quantification of the stubby root nematode Paratrichodorus allius from field soil DNA. https://apsnet.confex.com/apsnet/2019/meetingapp.cgi/Paper/13878. American Phytopathological Society Annual Meeting, Cleveland, OH, August 3-7. (abstract)

Yan, G. P., Plaisance, A., and Ye, W. (2015). Plant-parasitic nematodes on field crops in Southeastern and Northeastern North Dakota. American Phytopathological Society Annual Meeting, Pasadena, CA, August 1-5. (abstract)

Yan, G. P., Plaisance, A., Huang, D., and Handoo, Z. A. 2016. First detection of the stubby root nematode Paratrichodorus allius on potato in North Dakota and on sugarbeet in Minnesota. American Phytopathological Society Annual Meeting, Tampa, FL, July 30-August 3, 2016. (abstract)

Yan, G. P., Plaisance, A., Huang, D., Upadhaya, A., Gudmestad, N. C., and Handoo, Z. A. 2016. First report of the stubby root nematode Paratrichodorus allius on potato in North Dakota. Plant Disease 100: 1247. http://dx.doi.org/10.1094/PDIS-11-15-1350-PDN.

Yan, G. P., Huang, D., Plaisance, A., Gudmestad, N. C., Whitworth, J., Frost, K., Brown, C. R., Ye, W., Crow, B., and Hafez, S. L. 2017. Species and population densities of stubby root nematodes from multiple states in the United States. Phytopathology 107:S5.96 (abstract). https://doi.org/10.1094/PHYTO-107-12-S5.1

Yan, G. P., Huang, D., Gudmestad, N., Whitworth, J., Frost, K., Brown, C., Weimin, Y., Agudelo, P., and Crow, W. 2018. Molecular characterization and identification of stubby root nematode species from eight states in the USA. Abstracts of 57th Annual Meeting of the Society of Nematologists, pp 108-109.

Yellareddygari, S.K.R., Domfeh, O. Bittara, F.G., and Gudmestad, N.C. 2017. Analysis of Potato Mop-Top Virus survival probability in post-harvest storage. Amer. J. Potato Res. 94:632-637.

Yellareddygari, S.K.R, Brown, C.R., Whitworth, J.L., Quick, R.A., Hamlin, L.L., and Gudmestad, N.C. 2018. Assessing potato cultivar sensitivity to tuber necrosis caused by Tobacco rattle virus. Plant Dis. 102 (7): 1376-1385. doi.org/10.1094/PDIS-12-17-1918-RE

Yellareddygari, S.K.R, Robinson, A. P., and Gudmestad, N. C. 2018. Tobacco Rattle Virus in Potato. ND Extension Circular PP1896. 4pp.
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Zeng, Y., Fulladosa, A.C., Houser, A.C. and Charkowski, A. 2018. Analysis of seed potato certification data for limiting potato disease incidence in Colorado. Phytopathology 108 (Suppl. S) S1.2 (abstract)

Zeng, Y., Fulladosa, A. C., Houser, A., Charkowski, A. O. 2019. Colorado seed potato certification data analysis shows mosaic and blackleg are major diseases of seed potato and identifies tolerant potato varieties. Plant Disease 103: 192-199. doi/pdf/10.1094/PDIS-03-18-0484-RE

Zhai, Y., A. Hamid, I. Mallik, N.C. Gudmestad, S.M. Gray, and Pappu, H.R. 2018. Molecular Characterization, inter-isolate diversity and evolutionary lineage of Potato mop top virus isolates from the USA. Poster presented at the International Congress of Plant Pathology, Boston Convention Center, Boston, MA. July 29-August 3, 2018.

Zhai, Y. I. Mallik, A. Hamid1, A. Tabassum1, N. Gudmestad, S. M. Gray, and H. R. Pappu. (2019). Genetic diversity in Potato mop-top virus populations in the United States and a global analysis of the PMTV genome. Eur. J. Plant Path. (in press)

Zidack, N., Gray, S. Ugly Fight: Battling Tuber Necrotic Viruses. Potato Grower, May 2017.

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