What’s Cropping Up? Volume 30 No. 1 – January/February 2020 Now Available!

Soybean Cyst Nematode Now Confirmed in Six Additional Counties in New York

Jaime Cummings and Ken Wise, NYS Integrated Pest Management Program; Mike Hunter, Mike Stanyard, Aaron Gabriel and Kevin Ganoe, Cornell Cooperative Extension; Michael Dorgan, NYS Dept. of Agriculture and Markets

The soybean cyst nematode (SCN) is considered the number one pest of economic concern of soybeans nationally and globally, potentially causing 10-30% yield loss in the absence of above ground symptoms.  In 2017, national estimates reported over 109 million bushels lost to this pest in the U.S. alone.  Considering that this pest is confirmed in surrounding states and provinces, and given its potential to spread, statewide survey efforts have been underway since 2013 to determine the presence or absence of the soybean cyst nematode in NY.  From 2013-2016, numerous fields in 17 counties were sampled and tested as part of a statewide soybean disease survey led by Cornell’s Field Crops Pathology program, funded by Northern NY Agricultural Development Program and NY Corn and Soybean Growers Association.  In 2016, SCN was confirmed in one field in Cayuga County by Cornell’s USDA ARS Nematology lab, albeit at very low levels.  Since then, survey efforts have continued, because it is widely assumed that SCN is much more prevalent in NY.

In 2019, the NYS Integrated Pest Management Program was commissioned by NYS Department of Ag and Markets to coordinate a Cooperative Agricultural Pest Survey (CAPS) in soybeans with Cornell Cooperative Extension specialists to maintain vigilance against potentially invasive species.  For more information about the CAPS program and this survey effort, please refer to this article.  As part of this survey, 25 soil samples were collected from fields in 16 counties across NYS and were submitted for testing at the SCN Diagnostics laboratory.  Of those 25 samples, seven of them were positive for SCN in six different counties, confirming our suspicions that this pest is potentially widespread throughout soybean production areas in NY.  This brings us to a total of seven counties in NY with at least one field positive for SCN.  The counties identified with fields positive in 2019 include Columbia, Dutchess, Jefferson, Monroe, Tompkins and Wayne (Fig. 1).

SCN NYS location by county
Figure 1. Soybean cyst nematode survey efforts in NY since 2013. Counties colored in green had fields tested with negative results, and counties colored in red had one or more fields that tested positive. The first positive result was in Cayuga County in 216. In 2019, six more counties tested positive as a result of the soybean Cooperative Agricultural Pest Survey.

Thankfully, the egg counts in these positive samples were all below 500 eggs per cup of soil (250 cc of soil).  Although that may sound like a lot, these are very low numbers compared to the 10,000-80,000 egg counts that some growers struggle with in other states.  This means that we are in a good position to proactively manage for this pest before it gets out of hand and starts causing economic losses.

An integrated management approach will help NY soybean growers stay ahead of the soybean cyst nematode.  This involves continued testing efforts to monitor your fields for SCN.  Determining if you have the pest is the first step toward management.  For detailed information and recommendations on how to collect samples for SCN testing and where to send those samples to, please refer to this article.  If you get a positive result, keep records of your egg counts for each individual field.  Implement the following tactics when managing for this pest:

  1. SCN can be moved among fields on soil, whether it be via wind, water, equipment, or boots. Consider improving sanitation of equipment coming from fields with known SCN infestation to avoid spreading it to others.
  2. Crop rotation is the number one tool for managing SCN. Rotating to a non-host crop, such as corn, small grains, alfalfa, forage grasses and mixes for one year can reduce the nematode population by up to 50%.  Continuous soybean production in an infested field can increase nematode populations exponentially, since this pest can have up to three life cycles per season in NY.
  3. Select and plant soybean varieties with resistance to SCN, and rotate those resistant varieties that you plant.  The nematode quickly develops resistance to the resistant varieties when exposed to the same varieties over and over, in the same way that weeds develop resistance to over-used herbicides.
  4. Consider nematicidal seed treatments if your SCN populations start causing economic damage (Fig. 2). Research has shown that these products are only cost-effective with high SCN population levels causing significant damage.
  5. Keep testing. Continue to test fields that you get negative results from, and especially continue to test fields that you get positive results from.  Keep track of your egg counts in each field to know how your populations are changing, as that may affect your management strategy.  It is recommended that as long as egg counts remain below 30,000 eggs per cup of soil, crop rotation with SCN-resistant soybean varieties is the best approach.
SCN seed treatment table
Figure 2. Nematicidal seed treatments available for managing soybean cyst nematode.

Crop rotation is the most important tool, and we are lucky to have a number of non-host crops already in our rotations.  But, SCN has a fairly wide host range, including a number of our common weeds and cover crops.  Some of these weed and cover crop hosts include chickweed, some clovers, common mullein, henbit, pokeweed, vetch and purslane (Table 1).  That’s just another thing to remember as you plan your crop rotations and weed management strategies.

SCN host plants table

Keep in mind that testing for SCN can be tricky, since it can be difficult to detect at low population densities, and populations can be quite variable within a field (Fig. 3).  Focus your testing efforts on fields with unexplained lower yields, or fields with a history of Sudden Death Syndrome (SDS) or Brown Stem Rot.  It is well known that there is a strong correlation between the presence of SCN and SDS.  If you see patches of SDS in your field, that would be an ideal location to pull soil samples for testing for SCN.  For more information on the relationship between SDS and SCN, please refer to this article.

Variability of SCN within field
Figure 3. Grid sampling reveals high variability in soybean cyst nematode population densities within a single field. (Image courtesy of Iowa State University)

For more information on this pest and recommendations, please visit the Soybean Cyst Nematode Coalition website.  There you will find numerous resources explaining the resistance issues with this pest, how and where to test for it, management recommendations, and success stories.  Expanded SCN testing efforts will commence in 2020, supported by the NY Corn and Soybean Growers Association.  If you suspect SCN in your fields, contact your area Cornell Cooperative Extension specialist for assistance, they may be able to offer you free testing on suspect fields as part of the expanded testing efforts in 2020.

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Soybean Cooperative Agricultural Pest Survey: Vigilance against Potentially Invasive Species

Jaime Cummings and Ken Wise (NYS Integrated Pest Management Program), Mike Hunter, Mike Stanyard, Aaron Gabriel and Kevin Ganoe (Cornell Cooperative Extension), and Michael Dorgan (NYSDAM)

Cooperative Agriculture Pest Survey Header
 Image courtesy of Purdue University CAPS website

Annual funding in the Plant Protection Act 7721 supports the Cooperative Agricultural Pest Survey (CAPS) pest detection program, led by the USDA Animal and Plant Health Inspection Service (APHIS), to safeguard against introductions of potentially harmful plant pests and diseases.  These surveys ensure the early detection of potentially invasive species that could negatively impact U.S. agriculture and/or environmental resources.  The NYS Department of Agriculture and Markets (NYSDAM) works with APHIS to prioritize the potentially invasive species to monitor in economically important commodities in NY each year.  In 2019, NYSDAM partnered with the NYS Integrated Pest Management (IPM) program to coordinate a soybean CAPS survey to monitor for two potentially invasive moth species, as well as to expand monitoring of the soybean cyst nematode across New York soybean production areas.

The overarching goal of the CAPS program is to monitor for species that shouldn’t be here, and to confirm that they still aren’t in NY or even the U.S.  These surveys are often the result of cooperation among state and federal employees, such as APHIS pest inspectors, NYSDAM inspectors and extension specialists.  This ‘boots on the ground’ approach allows for broad coverage of the surveys across the state involving many individuals with agricultural and pest identification expertise.

Larva and moth
Figure 1. Golden twin spot moth and looper larva. (photos by S. Hatch and P. Hampson, Bugwood.org)

For the 219 soybean CAPS survey, two moth species that are already problematic elsewhere in the world, but not known to exist in the U.S. were selected.  The Golden Twin Spot moth (Chrysodeixis chalcites), which currently causes yield losses in Africa, Europe, the Middle East and Canada, has a larval stage known as a ‘looper’ which can cause significant damage to soybeans, tomato, cotton, tobacco, beans and potatoes (Fig. 1).  Feeding by the loopers can result in defoliation, and they can also cause foliar damage due to rolling leaves with webbing for nests.  The Silver Y moth (Autographa gamma), which is already a concern in many countries in Asia, Europe and Africa, also has a caterpillar larval state that can cause significant damage to soybeans and many other agronomically important crops, including beets, cabbage, hemp, peppers, sunflower, tomato, potato, wheat, corn and wheat (and many more) (Fig. 2).  These caterpillars also defoliate and harm leaves through rolling and webbing.  Given how potentially damaging an introduction of these pests could be to U.S. agriculture, it’s important that we are vigilant in our efforts to monitor for them and ensure they aren’t in NY.

Silver Y moth and larva
Figure 2. Silver Y moth and caterpillar larva. (photos by P. Mazzei and J. Brambila, Bugwood.org)

In addition to monitoring for these two moth species, we also prioritized a pest that has very high potential to affect soybean yields in NY, and one that has thus far only been confirmed in one field in NYS.  The soybean cyst nematode (SCN) is considered the number one pest of soybeans nationally and globally, causing an estimated 109 million bushels of yield loss in the U.S. in 2017.  Extensive collaborative sampling for this pest from 2014-2017, supported by the NY Corn and Soybean Growers Association and Northern NY Agricultural Development Program, was coordinated by Cornell University and Cornell Cooperative Extension programs.  Over the four years of the SCN survey, numerous fields in 17 counties were sampled, and one field in Cayuga County was identified as positive for SCN in 2016, albeit at very low levels (Fig. 3).  Though it’s promising that SCN wasn’t identified widely across NY, we are fairly confident that it is very likely in many more than just one field in one county.  Given the potential impact this pest could have on NY soybean (and dry bean) production, we decided to include this pest in the 2019 CAPS survey.

Soybean Cyst Nematode
Figure 3. Soybean cyst nematode survey efforts in 17 counties in NY from 2014-2017, with one positive ID in Cayuga County in 2016, and information from the SCN Coalition on why you should test for SCN.

Six collaborators (Jaime Cummings and Ken Wise of NYS IPM, and Mike Stanyard, Mike Hunter, Aaron Gabriel and Kevin Ganoe of CCE) spent part of their typical summer soybean scouting efforts from western, to central, to eastern and northern New York setting up and checking pheromone traps intended to monitor for the Golden Twin Spot moth and Silver Y moth (Fig. 4).  They communicated the importance of these surveys to cooperating farmers who agreed to host these traps in 25 fields across the state.  Any suspicious moths caught in the traps are submitted to the Cornell Insect Diagnostic Clinic for thorough identification.  Thus far, we have not caught any Silver Y or Golden Twin Spot moths.  And that’s good news!  As the growing season winds down, we will collect soil samples from the same 25 fields for SCN testing at the SCN Diagnostics laboratory.

CAPS survey distribution
Figure 4. Distribution of the 2019 soybean CAPS survey.

A funding proposal to continue this work in 2020 has been submitted.  If accepted, it may also be expanded to include a corn CAPS survey for other potentially invasive pests with additional locations in southwest and central NY.  For more information on the national CAPS program, please visit their website.  For additional information on the soybean cyst nematode, please visit the SCN Coalition website, and check out these resources on SCN efforts in NY:  Soybean Cyst Nematode Now Confirmed in NY, Sudden Death Syndrome and Soybean Cyst Nematode in Soybeans, Fall is the Time to Test for Soybean Cyst Nematode.

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Managing Oat Crown Rust to Prevent Yield Loss

Michael R. Fulchera, Gary C. Bergstroma, Mark E. Sorrellsb, and David Benscherb
aPlant Pathology and Plant-Microbe Biology Section and bPlant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY

Crown rust is a continuing threat to oat production in New York, and recent epidemics have cast a spotlight on this disease. To better advise growers on crown rust management, we examined the impact of crown rust on oat grain yields and the disease resistance of available and soon to be available varieties.

The fungal pathogen that causes this disease, Puccinia coronata var. avenae, is widespread in New York and often found on susceptible oat varieties. Characterized by bright-orange, blistering pustules, this disease can be seen from June through August (Figure 1). Once established in a field, disease progresses quickly as the spores of the fungus are dispersed by the wind. The spores are blown to new leaves, different plants and even other fields. Older crown rust lesions develop a black rust spore stage, and these spores can infect the alternate host, common buckthorn, providing early inoculum for oat infections in fields adjacent to infected buckthorn in the following May.

Pustules of crown rust
Figure 1. Orange-brown uredinial pustules (bearing urediniospores) of crown rust on oat leaves.

The pathogen requires living plants to survive so it rarely persists through the winter on oat in New York. However, viable crown rust spores from maturing oat crops in states to our south arrive in New York on wind currents each spring to commence annual epidemics. Some overwintering can occur in New York when the fungus moves back and forth between oat and common buckthorn (Figure 2).

Aecia of crown rust
Figure 2. Yellow-orange aecia (bearing aeciospores) of crown rust on buckthorn leaves in May.

Management of crown rust is best achieved through careful selection of an oat variety. Few options exist to combat the disease after plants are in the field. Some fungicides are labelled for crown rust control in New York, and some growers have realized a return in investment from a timely fungicide spray at or prior to panicle emergence. Crown rust significantly impacts the yield of susceptible varieties and in extreme cases may cause crop failure. Even slight visual symptoms around the soft dough growth stage can translate to yield loss (Figure 3). Rust pathogens are known to evolve quickly to overcome resistance, but based on several years of observation we have identified the varieties that currently are most resistant in New York (Table 1). If you are considering a spring oat planting, choose a variety with proven resistance to current populations of the crown rust fungus in New York.

Bar chart showing effect of crown rust on oat yields
Figure 3. Effect of crown rust infection on oat yields.
Crown rust infection can significantly impact spring oat yields. This plot shows the average predicted yields observed at different disease severities. This data was taken from 360 small research plots spread across western, central and eastern New York in 2015-17. The amount of crown rust damage to flag leaves in each plot was measured during early grain filling. Even when visual disease severity recorded at the soft dough growth stage appears as low as 5%, yield may be limited by crown rust.

Crown rust susceptibility tableLate summer forage plantings are at a higher risk for infection since the spores that cause disease will increase and spread throughout the growing season. When these forage plantings are infected, pathogen overwintering on buckthorn can be increased. This contributes to crop epidemics the following year and may speed the breakdown of oat varietal resistance.

Crown rust will continue to threaten oat yields, but you can reduce the spread of this disease by planting resistant varieties and notifying your local Cornell Cooperative Extension Field Crop Specialist or the Cornell Field Crops Pathology Program if you find the pathogen in your fields.

Reference on the complete study:

Fulcher, M.R., D. Benscher, M.E. Sorrells, and G.C. Bergstrom. 2020. Preserving spring oat yields in New York through varietal resistance to crown rust.Plant Health Progress Published On-line 21 January 2020 https://apsjournals.apsnet.org/doi/10.1094/PHP-05-19-0037-RS

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What’s Cropping Up? Volume 29 Number 3 – July/August 2019

White Mold of Soybean: What to expect with variable growth stages

Jaime Cummings and Ken Wise, NYS IPM

White mold
Figure 1. White mold infected soybean stem. (Photo by J. Cummings, NYS IPM)

It’s that time of year where we typically consider fungicide applications for white mold protection in our soybeans.  However, this year is a little different.  Soybeans across NY range from V4 to R4 this week, making it a challenging decision regarding whether or when to spray.  As you know, white mold (Sclerotinia stem rot) is our most challenging and undermanaged disease of soybeans across the state (Fig. 1).  It typically rears its ugly head when the rows and canopies close between growth stages R3-R6.  We have no silver bullet for this disease, and therefore rely on an integrated management approach for the best results.

The pathogen produces sclerotia, which are the hard, black survival structures that can easily survive in the soil for at least 10 years, with some reports of up to 20 years.  These long-lived sclerotia, and the wide host-range of this pathogen, make crop rotation as a management strategy difficult, if not impossible.  Resistance to this devastating disease is moderate, at best, in some elite commercial varieties, but none are immune or strongly resistant.  Canopy management is a goal of some growers who struggle with white mold, and efforts include reduced seeding rates and wider rows.  There is plenty of evidence that increased airflow in the crop rows can reduce white mold infection, because the disease is favored by the humid conditions of a dense and closed canopy.  Research on biological control with a product called Contans WG has shown limited or variable efficacy in New York and Michigan, and requires a multi-year commitment for applications for the best results.  However, some NY soybean growers have been successful at reducing white mold incidence and severity in their fields treated with Contans WG, and consider the results well-worth the $35 per acre cost.  Recent research at Cornell by Dr. Sarah Pethybridge (vegetable pathologist) has shown that planting soybeans into roller-crimped rye cover crops can significantly reduce the sporulation of the white mold fungus, resulting in significantly less disease.  Paying attention to the expected weather patterns and forecasting models, such as Sporecaster, are also critical in making white mold management decisions, because this disease can be particularly devastating in times of high precipitation or humidity during temperatures below 85°F.  Though, we have seen fairly severe epidemics in some fields even in hot, dry years.

Nozzle recommendations
Figure 2. Nozzle recommendations for white mold suppression from Michigan State University.

Timely foliar fungicide applications with appropriate nozzles for canopy penetration (Fig. 2), in combination with crop rotation, genetic resistance, canopy management, and biological control remains our best approach for managing white mold in soybean fields.  The main goal for your fungicide applications should be to get them applied BEFORE you have a major outbreak of white mold in your field.  If you have soybeans in a field with a history of the disease, and if the weather conditions are forecasted to be favorable for disease, it’s recommended to get a protective fungicide on between the R1 and R3 growth stages.  Fungicide applications can be a waste of money after R4.  It’s important to note that once you have an epidemic in a field, no amount of fungicide will stop or cure the spread.

Research results table
Figure 3. Research from North Dakota State University shows that combining wider row spacing with timely fungicide applications can decrease white mold disease severity and increase yields.

A number of foliar fungicides are labeled in NY for white mold protection on soybean that are rated ‘Good’ to ‘Very Good’ in the Cornell Guide for Integrated Field Crop Management, based on national replicated field trials.  These include Aproach, Endura, and Omega.  Other fungicides are rated as ‘Fair’, including Topguard, Proline, Domark, and Topsin-M.  It’s important to follow all label recommendations, and note that some products, such as Aproach, recommend two applications when other products may only require a single application.

Field trial results table
Figure 4. Field trial results in Michigan show that both Omega and Propulse fungicides each significantly increase soybean yields, particularly when white mold disease pressure is high.

There have been a lot of soybean white mold fungicide efficacy trials in other states that have similar weather patterns and epidemics to ours, including Michigan, Wisconsin and N. Dakota.   Dr. Michael Wunsch of N. Dakota State University demonstrated that increased row spacing in combination with timely application of Endura fungicide resulted in significantly lower disease incidence and higher yields compared to narrow rows and the non-treated control (Fig. 3).  Mike Staton of Michigan State University demonstrated that a comparison of the fungicides Omega and Propulse showed that they both significantly increased yields compared to the non-treated control, especially in trials with high disease pressure, but that Propulse was a much more cost-effective option (Figs. 4 and 5).  Dr. Damon Smith of University of Wisconsin evaluated the effect of various fungicide combinations and application timings on disease incidence and yield, and found significant improvements in yields from applications of Propulse + Delaro, Proline + Stratego, and a double application of Delaro (Fig. 6).  All registered products evaluated in these trials are labeled for use against white mold of soybeans in NY.

 

Fungicide trials results
Figure 5. White mold fungicide trials in Michigan demonstrate the economics of fungicide applications in fields with high and low disease pressure.
Fugicide efficacy data table
Figure 6. A table from University of Wisconsin outlines fungicide efficacy data on disease suppression and yield for various fungicides products and application timings. (Not all products evaluated in this trial are labeled for use in NY.)

Though we have a number of fungicides labeled for use on white mold in NY, not all field crop dealers carry all products, and pricing may vary by location.  When opting to utilize a fungicide application as part of your integrated management strategy for white mold, keep in mind that there are wide ranges in efficacy and cost among products.  A quick inquiry with only two sources provided prices or price ranges per acre of some of the products you may consider using, as outlined in Table 1 (in alphabetical order, at the highest labeled rates).

Fungicides for white mold in soybeans in NY

Considering the abnormally wide range in growth stages and canopy closure as we experience or approach flowering in our soybean fields, I think we can expect some difficulty in managing white mold in some locations this year.  One of the most perpetuated fallacies I hear is that white mold requires soybean flowers for infection.  Even though this is consistently mentioned in fact sheets and other resources, it is not entirely true.  A soybean plant at any growth stage can succumb to infection by the white mold fungus if the conditions are favorable and if the spores are in the air.  However, soybean flowering usually coincides with canopy closure, and this canopy closure encourages a humid environment within the rows which does enhance disease initiation and progression.  And, shed flower petals do provide a nice food source for germinating spores.  But, again, the flowers are not required for infection.

Although I have seen some nice soybean fields this year that were planted on time, either before or between all of the spring rain events we experienced, much of the soybean planting across the state was delayed this year due to wet conditions.  That means there may be closed canopies with flowering soybeans across the road from fields with much younger or smaller plants.  If the weather favors white mold with moderate temperatures, precipitation and humidity, the disease may initiate in one dense, flowering field and spread among many others.  Or, it may initiate in a field where the plants are stunted with a fairly open canopy, if it’s a field with a history of this disease and favorable weather conditions.  It’s anyone’s guess at when and where a white mold epidemic may happen this year given the variable growth stages and ranges in canopy closure.

Don’t despair, there’s still hope.  I haven’t heard many reports of white mold yet from across the state, which means you still have time to make management decisions.  Get out in your fields to scout, and pay attention to the weather.  Know what growth stages your soybeans are at and how your canopies are looking, and what your neighbors’ beans are doing.  If you have a history of white mold in your fields, and you know that the weather forecast for your area is favorable for the disease, then consider the most cost effective fungicide application to protect your crop.  If you expect dry conditions in a field without a history of white mold, then you can probably skip the fungicide application.  You know your fields best.  But, be aware that the variable growth stages this year may add an unexpected layer of complication to white mold management and timing of fungicide applications.

Thank you to Jeff Miller and Josh Putman of CCE, and Danny DiGiacomandrea of Bayer for assistance with fungicide price ranges.

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