Publications

Please find below a list of publications in the scientific literature resulting from the EVADE program.

2015

Pethybridge, S. J., and Nelson, S. C. 2015.  Leaf Doctor – a new application for assessing disease severity.  Plant Dis. 99:1310-1316.

Gorny, A. M., Kikkert, J. R., Dunn, A. R., Dillard, H. R., Smart, C. D., and Pethybridge, S. J. 2015. Tan spot of lima bean caused by Boeremia exigua in New York State. Can J. Plant Pathol. 37:523-528.

Pethybridge, S. J., Cobb, A. C., and Dillard, H. R. 2015.  Production of apothecia and ascospores of Sclerotinia sclerotiorum (revised).  The Plant Health Instructor.  Revision to DOI: 10.1094/PHI-T-2004-0604-01. Updated 2015.

2016

Vaghefi, N., Hay, F. S., Kikkert, J. R., and Pethybridge, S. J. 2016. Genotypic diversity and resistance to azoxystrobin of Cercospora beticola on processing table beet in New York.  Plant Dis. 100:1466-1473.

Pethybridge, S. J., Gorny, A., Hoogland, T., Jones, L., Hay, F. S., Smart, C. D., and Abawi, G. 2016.  Identification and characterization of Ditylenchus spp. populations from garlic in New York State, USA.  Trop. Plant Pathol. 41:193-197.

Gorny, A. M., Kikkert, J. R., Shivas, R. G., and Pethybridge, S. J. 2016. First report of Didymella americana on lima bean (Phaseolus lunatus). Can. J. Plant Pathol. 38:389-394.

Hay, F. S., Strickland, D., Maloney, E., Hoepting, C., and Pethybridge, S. J. 2016.  Anthracnose of onion caused by Colletotrichum coccodes in New York.  Plant Dis. 100:2171.

Vaghefi, N., Pethybridge, S. J., Shivas, R. G., and Nelson, S. C. 2016. First report of leaf spot caused by Paracercospora egenula on eggplant in Hawaii.  Austral. Plant Dis. Notes 11:1-3.

Vaghefi, N., Kikkert, J. R., and Pethybridge, S. J. 2016. Incidence and pathogenicity of Didymella americana on table beet in New York. Plant Health Progress 17:270-272.

2017

Hay, F. S., Vaghefi, N., Ivy, A., and Pethybridge, S. J. 2017. First report of carrot root rot caused by Rhexocercosporidium carotae in the United States.  Plant Dis. 101: 248.

Vaghefi, N., Kikkert, J. R., Bolton, M. D., Hanson, L. E., Secor, G. A., and Pethybridge, S. J. 2017. De novo genome assembly of Cercospora beticola for microsatellite development and validation.  Fungal Ecology 26:125-134.

Lehner, M. S., Pethybridge, S. J., Meyer, M. C., and Del Ponte, E. M. 2017. Meta-analytic modelling of the relationships of white mold incidence with soybean yield and sclerotia production in uniform fungicide trials.  Plant Pathol. 66:460-468.

Dunn, A. R., Kikkert, J. R., and Pethybridge, S. J. 2017. Genotypic characteristics in populations of Sclerotinia sclerotiorum from New York State, USA.  Ann. Appl. Biol. 170:219-228.

Lehner, M. S., Mizubuti, E., Del Ponte, E. M., and Pethybridge, S. J. 2017. Independently founded populations of Sclerotinia sclerotiorum from a tropical and temperate region have similar genetic structure.  PLoS ONE 12(3):e0173915.

Lehner, M., Kikkert, J. R., Gugino, B., and Pethybridge, S. J. 2017. Fungicide sensitivity and efficacy of boscalid, fluazinam and thiophanate-methyl for white mold control in snap bean.  Plant Dis. 101:1253-1258.

Cieniewicz, E. J., Pethybridge, S. J., Gorny, A., McLane, H., Perry, K. L., Madden, L. V., and Fuchs, M. 2017. Spatiotemporal spread of grapevine red blotch-associated virus in a California vineyard. Virus Res. 241:156-162 (collaboration with Fuchs Lab).

Vaghefi, N., Nelson, S. C., Kikkert, J. R., and Pethybridge, S. J. 2017. Genetic structure of Cercospora beticola populations on Beta vulgaris in New York and Hawaii.  Sci. Reports 7:1726.

Pethybridge, S. J., Vaghefi, N., and Kikkert, J. R. 2017. Management of Cercospora leaf spot in conventional and organic table beet production. Plant Dis. 101:1642-1651.

Shah, D. A., Dillard, H. R., and Pethybridge, S. J. 2017. Probability distributions for marketable pods and white mould in snap bean. Ann. Appl. Biol. 171:179-189.

Pethybridge, S. J., Kikkert, J. R., and Vaghefi, N. V. 2017.  Horticultural characteristics and susceptibility of table beet cultivars to Cercospora leaf spot in New York. Hort. Technol. 27:539-543.

Del Ponte, E. M., Pethybridge, S. J., Bock, C. H., Michereff, S. J., Machado, F. J., and Spolti, P. 2017. Standard area diagram aids for aiding severity estimation: scientometrics, pathosystems and methodological trends in the last 25 years. Phytopathology 107:1161-1174.

Hay, F. S., Maloney, E., Vaghefi, N., Shivas, R. G., and Pethybridge, S. J. 2017. First report of Cercospora blight of Asparagus officinalis cause by Cercospora asparagi in New York. Plant Dis. 101:1953.

Nelson, S. C., Corcoja, I., and Pethybridge, S. J. 2017. Cluster: a new application for spatial analysis of pixelated data for epidemiology. Phytopathology 107:1556-1566.

Vaghefi, N., Kikkert, J. R., Bolton, M. D., Hanson, L. E., Secor, G. A., Nelson, S. C., and Pethybridge, S. J. 2017. Global genotype flow in Cercospora beticola populations confirmed through genotyping-by-sequencing.  PLoS ONE 12(10):e0186488.

2018

Shah, D. A., Dillard, H. R., and Pethybridge, S. J. 2018. Hierarchical models for white mould in snap bean. Plant Pathol. 67:145-155.

Pethybridge, S. J., and Nelson, S. C. 2018. Estimate, a new iPad application for assessment of plant disease severity using photographic standard area diagrams. Plant Dis. 102:276-281.

Pethybridge, S. J., Hay, F. S., Gorny, A. M., and Kikkert, J. R. 2018. Spatiotemporal attributes and crop loss associated with tan spot epidemics in baby lima bean in New York. Plant Dis. 102:405-412.

Cieniewicz, E., Pethybridge, S. J., Loeb, G., Perry, K., and Fuchs, M. 2018. Insights into the ecology of grapevine red blotch virus in a diseased vineyard. Phytopathology 108:94-102 (Collaboration with Fuchs Lab).

Gorny, A. M., Hay, F. S., Wang, X., and Pethybridge, S. J. 2018. Isolation of nematode DNA from 100 g of soil using Fe3O4 super paramagnetic nanoparticles. Nematology 20:271-283.

Vaghefi, N., Kikkert, J. R., Hay, F. S., Carver, G. D., Koenick, L. B., Bolton, M. D., Hanson, L. E., Secor, G. A., and Pethybridge, S. J. 2018. Cryptic diversity, pathogenicity, and evolutionary species boundaries in Cercospora populations associated with Cercospora leaf spot of Beta vulgaris. Fungal Biol. 122:264-282.

Wingfield, B. D., Bills, G. F., Dong, Y., Huang, W., Nel, W. J., Swalarsk-Parry, B. S., Vaghefi, N., Wilken, M., An, Z., de Beer, Z. W., De Vos, L., Chen, L., Duong, T. A., Gao, Y., Hammerbacher, A., Kikkert, J. R., Li, Y., Li, H., Li, K., Li, Q., Liu, X., Ma, X., Naidoo, K., Pethybridge, S. J., Sun, J., Steenkamp, E. T., van der Nest, M., van Wyk, S., Wingfield, M. J., Xiong, C., Yue, Q., and Zhang, X. 2018. Draft genome sequences of Annulohypoxylon stygium, Aspergillus mulundensi, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata.  IMA Fungus 9(1):199-223.

Pethybridge, S. J., Kikkert, J. R., Hanson, L. E., and Nelson, S. C. 2018. Challenges and prospects for building resilient disease management strategies and tactics for the New York table beet industry. Review Article. Agronomy 8(7):112.

Hay, F. S., Vaghefi, N., Strickland, D., Hadad, R., and Pethybridge, S. J. 2018. First report of Colletotrichum fioriniae causing anthracnose of elephant garlic (Allium ampeloprasum) in New York, USA. New Dis. Rep. 38:1.

Knight, N. L., Vaghefi, N., Hansen, Z. R., Kikkert, J. R., and Pethybridge, S. J. 2018. Temporal differentiation and shifts in genetic structure of Cercospora beticola populations in table beet fields of New York. Plant Dis. 102:2074-2082.

2019

Pethybridge, S. J., Sharma, S., Silva, A., Bowden, C., Murphy, S., Knight, N. L., and Hay, F. S. 2019. Southern Sclerotium root rot caused by Athelia rolfsii on table beet in New York. Plant Health Progress 20:4-6.

Savary, S., Willocquet, L., Pethybridge, S. J., Esker, P., McRoberts, N., and Nelson, A. 2019. Assessing the global burden of pathogens and pests on major food crops. Nature Ecology and Evolution 3:430-439.

Pethybridge, S. J., Gugino, B. K., and Kikkert, J. R. 2019. Efficacy of Double Nickel LC (Bacillus amyloliquefaciens D747 strain) for white mold control in snap and dry bean. Plant Health Progress 20:61-66.

Koenick, L. B., Kikkert, J. R., and Pethybridge, S. J. 2019. Phoma leaf spot susceptibility and horticultural characteristics of table beet cultivars in New York. Plant Health Progress 20:95-103.

Del Ponte, E. M., Nelson, S. C., and Pethybridge, S. J. 2019. Evaluation of app-embed disease scales for aiding visual severity estimation of Cercospora leaf spot of table beet. Plant Dis. 103:1347-1356.

Koenick, L. B., Knight, N. L., Vaghefi, N., du Toit, L. J., and Pethybridge, S. J. 2019. Genetic diversity and differentiation in Phoma betae populations on table beet in New York and Washington State. Plant Dis. 103:1487-1497.

Sharma, S., Pethybridge, S. J., Buck, E. M., and Hay, F. S. 2019. First report of leaf curl on celery (Apium graveolens dulce) caused by Colletotrichum fioriniae in New York. Plant Dis. 103:1791.

Vaghefi, N., Silva, A., Koenick, L. B., and Pethybridge, S. J. 2019. Genome resource for Neocamarosporium betae (syn. Pleospora betae), the cause of Phoma leaf spot and root rot on Beta vulgaris. MPMI (Resource Announcement). 32:787-789.

Knight, N. L., Vaghefi, N., Kikkert, J. R., Bolton, M. D., Secor, G. A., Hanson, L. E., Nelson, S. C., and Pethybridge, S. J. 2019. Genetic diversity and structure in regional Cercospora beticola populations from Beta vulgaris ssp. vulgaris suggest two clusters of separate origin. Phytopathology 109:1280-1292.

Gorny, A. M., Wang, X., Hay, F. S., and Pethybridge, S. J. 2019. Development of a species-specific quantitative PCR for detection and quantification of Meloidogyne hapla using the 16D10 root-knot nematode effector gene. Plant Dis. 103:1902-1909.

Knight, N. L., Vaghefi, N., Kikkert, J. R., and Pethybridge, S. J. 2019. Alternative hosts of Cercospora beticola in field surveys and inoculation trials. Plant Dis. 103:1983-1990.

Comments are closed